RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 PPP1R16BQ96T49 567 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 CALN1Q9BXU9 219 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 YIPF3Q9GZM5 350 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 ARMCX1Q9P291 453 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 IP6K2Q9UHH9 426 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 SCINQ9Y6U3 715 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 TMEM191CA6NGB0 347 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 VWA5AO00534 786 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 CSDE1O75534 798 aaKnown RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 PSAPP07602 524 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 TMEM191BP0C7N4 346 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 PSMA2P25787 234 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 CCND2P30279 289 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 ALDH3A1P30838 453 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 CDH8P55286 799 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 ZBTB16Q05516 673 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 PDK4Q16654 411 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 RAB6CQ53S08 254 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 RNASEH2BQ5TBB1 312 aaKnown RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 NAIF1Q69YI7 327 aaPredicted RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 NPNTQ6UXI9 565 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 UNC45BQ8IWX7 931 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 PALM2Q8IXS6 379 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 RCOR2Q8IZ40 523 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 MCPH1Q8NEM0 835 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 CCHCR1Q8TD31 782 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 FAXDC2Q96IV6 333 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 PAFAH2Q99487 392 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 IMPG2Q9BZV3 1241 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 RAB6CQ9H0N0 254 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 DENND2DQ9H6A0 471 aaPredicted RBP12.6□□□□□ -0.39
RBM39-206ENST00000403542 DOCK5Q9H7D0 1870 aa12.6□□□□□ -0.39
RBM39-206ENST00000403542 hCG_1818297A0A087WSY0 165 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 F5H423 210 aaPredicted RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 GJB1P08034 283 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 ATP4AP20648 1035 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 MMP8P22894 467 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 HSPA1LP34931 641 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 VCPP55072 806 aaKnown RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 SNRPFP62306 86 aaKnown RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 TFDP3Q5H9I0 405 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 THNSL1Q8IYQ7 743 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 RSAD2Q8WXG1 361 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 WDR83Q9BRX9 315 aaKnown RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 TRIM56Q9BRZ2 755 aaKnown RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 SYNCQ9H7C4 482 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 PSMC3IPQ9P2W1 217 aaPredicted RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 STARD13Q9Y3M8 1113 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 PEX11AO75192 247 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 CCNHP51946 323 aaPredicted RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 ZNF677Q86XU0 584 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 IGDCC3Q8IVU1 814 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 KIAA0319LQ8IZA0 1049 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 CEP120Q8N960 986 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 C10orf82Q8WW14 230 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 RBM41Q96IZ5 413 aaKnown RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 FAM111AQ96PZ2 611 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 RAB3IPQ96QF0 476 aaPredicted RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 HEY2Q9UBP5 337 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 CCDC195A0A1B0GUA6 201 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 ATP2A1O14983 1001 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 GRAP2O75791 330 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 TMEM63AO94886 807 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 KITP10721 976 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 CDKN2BP42772 138 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 CNTN2Q02246 1040 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 CDO1Q16878 200 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 TMEM132AQ24JP5 1023 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 DSTYKQ6XUX3 929 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 PHF13Q86YI8 300 aaPredicted RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 LRRC71Q8N4P6 559 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 WDTC1Q8N5D0 677 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 CPT1BQ92523 772 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 GMLQ99445 158 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 TIPINQ9BVW5 301 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 ZNF395Q9H8N7 513 aaPredicted RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 MARCOQ9UEW3 520 aaPredicted RBP12.59□□□□□ -0.39
RBM39-206ENST00000403542 RABGEF1Q9UJ41 708 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 POLIQ9UNA4 740 aa12.59□□□□□ -0.39
RBM39-206ENST00000403542 TYROBPO43914 113 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 PLA2G6O60733 806 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 GEMIN4P57678 1058 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 NR1H3Q13133 447 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 OASLQ15646 514 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 DENND1BQ6P3S1 775 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.58□□□□□ -0.4
RBM39-206ENST00000403542 CTAGE3PQ8IX95 158 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 NAF1Q96HR8 494 aaKnown RBP12.58□□□□□ -0.4
RBM39-206ENST00000403542 MIPEPQ99797 713 aa12.58□□□□□ -0.4
RBM39-206ENST00000403542 MECRQ9BV79 373 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms