RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TTC38Q5R3I4 469 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SDHAF4Q5VUM1 108 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SPATA1Q5VX52 437 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ITIH5Q86UX2 942 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SFTPA1Q8IWL2 248 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 FRMD1Q8N878 549 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SNX29Q8TEQ0 813 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 P2RY13Q9BPV8 354 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 OXCT2Q9BYC2 517 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 TMEM9BQ9NQ34 198 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 THG1LQ9NWX6 298 aaKnown RBP12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 HSFX1Q9UBD0 423 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 UBQLN1Q9UMX0 589 aaKnown RBP12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
SPTLC1P3-201ENST00000403408 ANO9A1A5B4 782 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PIRO00625 290 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 RHOBTB1O94844 696 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FGF19O95750 216 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 NFICP08651 508 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CLTAP09496 248 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DRD1P21728 446 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CDC25CP30307 473 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DGKEP52429 567 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FAM193AP78312 1265 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ELF2Q15723 593 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CCDC142Q17RM4 750 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 UAP1L1Q3KQV9 507 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 HAUS3Q68CZ6 603 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 JADE1Q6IE81 842 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SLC39A4Q6P5W5 647 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ZPBP2Q6X784 338 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PNMA5Q96PV4 448 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CYP2S1Q96SQ9 504 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 LINC00597Q9H2U6 94 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ECT2Q9H8V3 914 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TMEM74BQ9NUR3 256 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TCHHQ07283 1943 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SPAARA0A1B0GVQ0 90 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 K7EQS6 105 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CLDN3O15551 220 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PLS3P13797 630 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 GBP1P32455 592 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ZXDBP98169 803 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ZNF77Q15935 545 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 EML3Q32P44 896 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ZC2HC1CQ53FD0 456 aaPredicted RBP12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ARSHQ5FYA8 562 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PIP4P1Q86T03 277 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MDGA1Q8NFP4 955 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FNBP1Q96RU3 617 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 FSCN3Q9NQT6 498 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SOBPA7XYQ1 873 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ODC1P11926 461 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 OPRD1P41143 372 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TUFMP49411 452 aaKnown RBP12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ORC2Q13416 577 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PDIA5Q14554 519 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PTPAQ15257 358 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SAFBQ15424 915 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 WSCD1Q658N2 575 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TMEM92Q6UXU6 159 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MON1AQ86VX9 555 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 OLIG1Q8TAK6 271 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 USP33Q8TEY7 942 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 RLN3Q8WXF3 142 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PIGKQ92643 395 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 CD101Q93033 1021 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 C17orf75Q9HAS0 396 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 ABI2Q9NYB9 513 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MBD1Q9UIS9 605 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 MSRB2Q9Y3D2 182 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 NEUROG3Q9Y4Z2 214 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
SPTLC1P3-201ENST00000403408 GOLGA4Q13439 2230 aaKnown RBP12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 URB1O60287 2271 aaKnown RBP12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 TISP43B9A030 160 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 AVPR1AP37288 418 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 PTGER3P43115 390 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SLC12A3P55017 1021 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
SPTLC1P3-201ENST00000403408 SEC13P55735 322 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms