RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 TNFSF9P41273 254 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 ASPAP45381 313 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 CBLBQ13191 982 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 TRIP13Q15645 432 aaPredicted RBP13.72□□□□□ -0.21
PRAME-203ENST00000402697 ZFYVE27Q5T4F4 411 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 RGS9BPQ6ZS82 235 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 BBS12Q6ZW61 710 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 SLC35B2Q8TB61 432 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 ELAC2Q9BQ52 826 aaKnown RBP13.72□□□□□ -0.21
PRAME-203ENST00000402697 TACO1Q9BSH4 297 aaKnown RBP13.72□□□□□ -0.21
PRAME-203ENST00000402697 ASB7Q9H672 318 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 RPF1Q9H9Y2 349 aaKnown RBP13.72□□□□□ -0.21
PRAME-203ENST00000402697 TXNRD2Q9NNW7 524 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 SLC40A1Q9NP59 571 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 HAUS2Q9NVX0 235 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 KIAA1257Q9ULG3 409 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 ARL2BPQ9Y2Y0 163 aa13.72□□□□□ -0.21
PRAME-203ENST00000402697 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 KRT3P12035 628 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 HARSP12081 509 aaKnown RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 ATF7P17544 494 aaPredicted RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 BRD2P25440 801 aaKnown RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 STX2P32856 288 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 PHBP35232 272 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 ARSEP51690 589 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 ZNF252P-AS1Q0IIN9 211 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 ACVR2BQ13705 512 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 C2CD6Q53TS8 623 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 ZNF484Q5JVG2 852 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 LLGL2Q6P1M3 1020 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 PHLDB2Q86SQ0 1253 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 ZBTB33Q86T24 672 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 MAML1Q92585 1016 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 NCAPGQ9BPX3 1015 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 KCNK9Q9NPC2 374 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 FAM47DPA6NHR8 397 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 MAGEB2O15479 319 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 STAU1O95793 577 aaKnown RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 SRGAP2CP0DJJ0 459 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 MCF2P10911 925 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 TFAMQ00059 246 aaKnown RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 RNASEH2BQ5TBB1 312 aaKnown RBP13.71□□□□□ -0.21
PRAME-203ENST00000402697 FUKQ8N0W3 1084 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 WDTC1Q8N5D0 677 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 MROH8Q9H579 483 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.21
PRAME-203ENST00000402697 DNAJC25-GNG10A0A024R161 153 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 EXOC1LA0A1B0GW35 172 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 LRRD1A4D1F6 860 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 ZBTB42B2RXF5 422 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 F8VP50 259 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 GJB6O95452 261 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 HMGCRP04035 888 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 PSMA2P25787 234 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 PCK1P35558 622 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 PHKA2P46019 1235 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 GABRB2P47870 512 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 CCDC15Q0P6D6 951 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 GPS1Q13098 491 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 STILQ15468 1287 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 Q3C1V9 767 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 UBAP2Q5T6F2 1119 aaKnown RBP13.7□□□□□ -0.22
PRAME-203ENST00000402697 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 PPIL6Q8IXY8 311 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
PRAME-203ENST00000402697 GTF3C2Q8WUA4 911 aaPredicted RBP13.7□□□□□ -0.22
PRAME-203ENST00000402697 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 FGD4Q96M96 766 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 RBPJLQ9UBG7 517 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 ANK1P16157 1881 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 PLXNA1Q9UIW2 1896 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 ASB14A6NK59 587 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 TCP11X1B4DZS4 312 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 CAPN15O75808 1086 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 GJC1P36383 396 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 SKIV2L2P42285 1042 aaKnown RBP13.7□□□□□ -0.22
PRAME-203ENST00000402697 IFNAR2P48551 515 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 VPS41P49754 854 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 RIPK1Q13546 671 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 KCTD2Q14681 263 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 LLGL1Q15334 1064 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 CCDC38Q502W7 563 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 KAZNQ674X7 775 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 CCDC62Q6P9F0 684 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 FASTKD5Q7L8L6 764 aaKnown RBP13.7□□□□□ -0.22
PRAME-203ENST00000402697 SPATA21Q7Z572 469 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 RPAINQ86UA6 219 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 TRABD2AQ86V40 505 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 VSIG1Q86XK7 387 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 SHCBP1Q8NEM2 672 aa13.7□□□□□ -0.22
PRAME-203ENST00000402697 FRMD8Q9BZ67 464 aaPredicted RBP13.7□□□□□ -0.22
PRAME-203ENST00000402697 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
PRAME-203ENST00000402697 COL1A2P08123 1366 aa13.69□□□□□ -0.22
PRAME-203ENST00000402697 C3orf70A6NLC5 250 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms