RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
NDEL1-203ENST00000402554 AGAP1Q9UPQ3 857 aa13.91□□□□□ -0.18
NDEL1-203ENST00000402554 PIN4Q9Y237 131 aaKnown RBP13.91□□□□□ -0.18
NDEL1-203ENST00000402554 ALG6Q9Y672 507 aa13.91□□□□□ -0.18
NDEL1-203ENST00000402554 FNDC1Q4ZHG4 1894 aaPredicted RBP13.9□□□□□ -0.18
NDEL1-203ENST00000402554 EPOPA6NHQ4 379 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 RFXAPO00287 272 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 CFHP08603 1231 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 HTRA4P83105 476 aaPredicted RBP13.9□□□□□ -0.18
NDEL1-203ENST00000402554 MESDQ14696 234 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
NDEL1-203ENST00000402554 ZNF394Q53GI3 561 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 LIN9Q5TKA1 542 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 HPDLQ96IR7 371 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 SNX27Q96L92 541 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 RGS18Q9NS28 235 aa13.9□□□□□ -0.18
NDEL1-203ENST00000402554 RBM12Q9NTZ6 932 aaKnown RBP13.9□□□□□ -0.18
NDEL1-203ENST00000402554 LINC01553A4QN01 128 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 MIF4GDA9UHW6 222 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 DDX3YO15523 660 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 LSM8O95777 96 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 STAU1O95793 577 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 MCM3P25205 808 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 SSTR3P32745 418 aaPredicted RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 GUCY2FP51841 1108 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 CC2D1AQ6P1N0 951 aaPredicted RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 WDR93Q6P2C0 686 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 MON1BQ7L1V2 547 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 PHF13Q86YI8 300 aaPredicted RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 TMEM130Q8N3G9 435 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 ARNTL2Q8WYA1 636 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 VCPIP1Q96JH7 1222 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 CYP3A43Q9HB55 503 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 ARFGAP3Q9NP61 516 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 ADAM22Q9P0K1 906 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 CITO14578 2027 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 C9IYK1 514 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 PGRMC1O00264 195 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 ERLIN1O75477 346 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 COMTP21964 271 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 RRM1P23921 792 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 BRD2P25440 801 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 RAP1GAPP47736 663 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 RNASE9P60153 205 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 VSNL1P62760 191 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 NPAS4Q8IUM7 802 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 CRIPAKQ8N1N5 446 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 RASGEF1CQ8N431 466 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 UBL4BQ8N7F7 174 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 RNF169Q8NCN4 708 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 C11orf70Q9BRQ4 267 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 SMYD3Q9H7B4 428 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 RC3H2Q9HBD1 1191 aaKnown RBP13.89□□□□□ -0.19
NDEL1-203ENST00000402554 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 HES2Q9Y543 173 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
NDEL1-203ENST00000402554 RALGAPA2Q2PPJ7 1873 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 PAEPP09466 180 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 FGFR1P11362 822 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 CDH8P55286 799 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
NDEL1-203ENST00000402554 MYO1EQ12965 1108 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
NDEL1-203ENST00000402554 HNRNPLLQ8WVV9 542 aaKnown RBP13.88□□□□□ -0.19
NDEL1-203ENST00000402554 BTBD6Q96KE9 485 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 C17orf80Q9BSJ5 609 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 LRRC1Q9BTT6 524 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 APOL6Q9BWW8 343 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 SDCBP2Q9H190 292 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 CARD9Q9H257 536 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 NXF3Q9H4D5 531 aaKnown RBP13.88□□□□□ -0.19
NDEL1-203ENST00000402554 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 PCDHGC3Q9UN70 934 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 COL6A3P12111 3177 aa13.88□□□□□ -0.19
NDEL1-203ENST00000402554 MED7O43513 233 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
NDEL1-203ENST00000402554 DGKIO75912 1065 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 RECQL4O94761 1208 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 CD19P15391 556 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 TNNC1P63316 161 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 GLE1Q53GS7 698 aaKnown RBP13.87□□□□□ -0.19
NDEL1-203ENST00000402554 UBXN11Q5T124 520 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 TWF2Q6IBS0 349 aaKnown RBP13.87□□□□□ -0.19
NDEL1-203ENST00000402554 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 MMS22LQ6ZRQ5 1243 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 SLC24A5Q71RS6 500 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 TMEM35BQ8NCS4 154 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 BEST2Q8NFU1 509 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 TFAP2BQ92481 460 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
NDEL1-203ENST00000402554 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 ZNF518BQ9C0D4 1074 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 CXCL16Q9H2A7 254 aa13.87□□□□□ -0.19
NDEL1-203ENST00000402554 FAM124BQ9H5Z6 455 aaPredicted RBP13.87□□□□□ -0.19
NDEL1-203ENST00000402554 CNTN3Q9P232 1028 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms