RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 ALDH1A2O94788 518 aa13□□□□□ -0.33
CACNA1C-209ENST00000399603 FAM200BP0CF97 657 aa13□□□□□ -0.33
CACNA1C-209ENST00000399603 ATP1A3P13637 1013 aa13□□□□□ -0.33
CACNA1C-209ENST00000399603 LRPAP1P30533 357 aa13□□□□□ -0.33
CACNA1C-209ENST00000399603 CAMK1Q14012 370 aa13□□□□□ -0.33
CACNA1C-209ENST00000399603 LPCAT2Q7L5N7 544 aa13□□□□□ -0.33
CACNA1C-209ENST00000399603 IPCEF1Q8WWN9 437 aaPredicted RBP13□□□□□ -0.33
CACNA1C-209ENST00000399603 GON4LQ3T8J9 2241 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 USP17L3A6NCW0 530 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 USP17L4A6NCW7 530 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 PSIP1O75475 530 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 MED26O95402 600 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 CALB1P05937 261 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 PSAPP07602 524 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 HMBSP08397 361 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 NAA30Q147X3 362 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 USP17L1Q7RTZ2 530 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 GPD1LQ8N335 351 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 AMACRQ9UHK6 382 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 STAP1Q9ULZ2 295 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 MEI4A8MW99 385 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 IKBKBO14920 756 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 MMP10P09238 476 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 EPS8L2Q9H6S3 715 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 CLTBP09497 229 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 ORC2Q13416 577 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 USF2Q15853 346 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 TBKBP1A7MCY6 615 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 SSNA1O43805 119 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 LBPP18428 481 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 ZNF544Q6NX49 715 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 LSM1O15116 133 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 PRODHO43272 600 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 SNUPNO95149 360 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 EFR3AQ14156 821 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 RNF19BQ6ZMZ0 732 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 MSANTD1Q6ZTZ1 278 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 ZNF671Q8TAW3 534 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 CELF1Q92879 486 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 TRPC4Q9UBN4 977 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 FHOD1Q9Y613 1164 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 TIMM44O43615 452 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 CPSF4O95639 269 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 CLPTM1O96005 669 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 DSG3P32926 999 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 CCNA1P78396 465 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 ATG14Q6ZNE5 492 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 XXYLT1Q8NBI6 393 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 MRPL48Q96GC5 212 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 SENP7Q9BQF6 1050 aa12.99□□□□□ -0.33
CACNA1C-209ENST00000399603 FTLP02792 175 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 MYBPC2Q14324 1141 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 NEDD8Q15843 81 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 FAM213AQ9BRX8 229 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 SLC40A1Q9NP59 571 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 SLC30A1Q9Y6M5 507 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 ARHGAP31Q2M1Z3 1444 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 CCDC166P0CW27 439 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 CCNE1P24864 410 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 MPP2Q14168 576 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 TRIM65Q6PJ69 517 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 ADD3Q9UEY8 706 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 IP6K2Q9UHH9 426 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 SLC25A13Q9UJS0 675 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 MAP3K4Q9Y6R4 1608 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 PRR23AA6NEV1 266 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 KPNA5O15131 536 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 CLDN3O15551 220 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 GTF2E2P29084 291 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 GNA15P30679 374 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 CASP4P49662 377 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 TIGD7Q6NT04 549 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 NEK5Q6P3R8 708 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 SGF29Q96ES7 293 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 AFF2P51816 1311 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 CPB1P15086 417 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 ARHGDIBP52566 201 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 AK8Q96MA6 479 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 TRIM62Q9BVG3 475 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 LAD1O00515 517 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 EXTL3O43909 919 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 HSPA13P48723 471 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 POU4F1Q01851 419 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 KYNUQ16719 465 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 C2CD6Q53TS8 623 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 BTBD8Q5XKL5 378 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 TBC1D10CQ8IV04 446 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 NSL1Q96IY1 281 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 TBATAQ96M53 351 aa12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 BSDC1Q9NW68 430 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-209ENST00000399603 SYNMO15061 1565 aa12.97□□□□□ -0.33
CACNA1C-209ENST00000399603 AP3D1O14617 1153 aa12.97□□□□□ -0.33
CACNA1C-209ENST00000399603 KPNB1Q14974 876 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms