RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CTSEP14091 401 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 YWHAQP27348 245 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SYT2Q8N9I0 419 aaPredicted RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 USP33Q8TEY7 942 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 FMO2Q99518 471 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 VPS11Q9H270 941 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SPTLC3Q9NUV7 552 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 LNPEPQ9UIQ6 1025 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 ATP9BO43861 1147 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SUPT3HO75486 399 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 GJB1P08034 283 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 ANXA11P50995 505 aaKnown RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 CAMK2GQ13555 558 aaPredicted RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 PCSK7Q16549 785 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 FBXO47Q5MNV8 452 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CFAP61Q8NHU2 1237 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 WHAMMQ8TF30 809 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CNOT10Q9H9A5 744 aaKnown RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 POLD4Q9HCU8 107 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 FGFR1OP2Q9NVK5 253 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 DDX43Q9NXZ2 648 aaKnown RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 SNTG2Q9NY99 539 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 TRIM49BA6NDI0 452 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 IRF6O14896 467 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SELPP16109 830 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 NCF2P19878 526 aaPredicted RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 PTPN3P26045 913 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 TM4SF1P30408 202 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 MAP3K7CLP57077 242 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 FPGSQ05932 587 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 KRT72Q14CN4 511 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 AMHR2Q16671 573 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 EDRF1Q3B7T1 1238 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SPRYD7Q5W111 196 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 RRM2BQ7LG56 351 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 KDELC2Q7Z4H8 507 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CATSPER3Q86XQ3 398 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SNF8Q96H20 258 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 WDR18Q9BV38 432 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 DDX20Q9UHI6 824 aaKnown RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 ADAMTS1Q9UHI8 967 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 ARHGAP26Q9UNA1 814 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 NFASCO94856 1347 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 FRMD3A2A2Y4 597 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 ZNF263O14978 683 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 HMGB3O15347 200 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 KRT20P35900 424 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 ELMO2Q96JJ3 720 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 RANBP17Q9H2T7 1088 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 A0A087WUV0 522 aaPredicted RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 NFIBO00712 420 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 PALMO75781 387 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 WEE1P30291 646 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 GPS1Q13098 491 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 CUL2Q13617 745 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 NOMO2Q5JPE7 1267 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 GPAT2Q6NUI2 795 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 SLC30A10Q6XR72 485 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 SPATS2Q86XZ4 545 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 PDGFDQ9GZP0 370 aaPredicted RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 UPF3AQ9H1J1 476 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 ATP8A1Q9Y2Q0 1164 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 NR2E1Q9Y466 385 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 FMN2Q9NZ56 1722 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 MOXD2PA6NHM9 499 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 PP2D1A8MPX8 630 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 PSMD12O00232 456 aaPredicted RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 HGSO14964 777 aaPredicted RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 SUN1O94901 812 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 KRT14P02533 472 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 SETSIPP0DME0 302 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 EXOSC10Q01780 885 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 SLC35F6Q8N357 371 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 PTPRN2Q92932 1015 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 ARHGEF26Q96DR7 871 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 HES6Q96HZ4 224 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 ABHD8Q96I13 439 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 EPB41L5Q9HCM4 733 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 METTL5Q9NRN9 209 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 CD274Q9NZQ7 290 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 GOLGA8TH3BQL2 631 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 M0QYT0 321 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 IGSF6O95976 241 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 ADH1CP00326 375 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 ASGR1P07306 291 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 GFAPP14136 432 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 GUCY1A2P33402 732 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 PCK1P35558 622 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 NCALDP61601 193 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 NAPEPLDQ6IQ20 393 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 BHMTQ93088 406 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.3□□□□□ -1.084e-6■□□□□ 8
USP47-203ENST00000399455 PDCD2LQ9BRP1 358 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 INTS9Q9NV88 658 aaKnown RBP8.3□□□□□ -1.08
USP47-203ENST00000399455 DDIT4Q9NX09 232 aa8.3□□□□□ -1.08
USP47-203ENST00000399455 PCDHB2Q9Y5E7 798 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms