RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 PAPOLAP51003 745 aaKnown RBP13.9□□□□□ -0.18
TOP3B-202ENST00000398793 CUL2Q13617 745 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 PSMD6Q15008 389 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 ZIM3Q96PE6 472 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 GTF2IRD1Q9UHL9 959 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 IPPQ9Y573 584 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 RBM47A0AV96 593 aaKnown RBP13.9□□□□□ -0.18
TOP3B-202ENST00000398793 RRN3P2A6NIE6 340 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 UNCXA6NJT0 531 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 CLDN5O00501 218 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 C2CD2LO14523 706 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 AHCYL1O43865 530 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 ADAMTS4O75173 837 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 ECEL1O95672 775 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 MARCKSL1P49006 195 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 MARSP56192 900 aaKnown RBP13.9□□□□□ -0.18
TOP3B-202ENST00000398793 MTM1Q13496 603 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 HHATQ5VTY9 493 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 NOTUMQ6P988 496 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 SLC9A9Q8IVB4 645 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 SLC35G2Q8TBE7 412 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 EPS8L1Q8TE68 723 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 HDAC7Q8WUI4 952 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 TFAP2BQ92481 460 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 OSBPL9Q96SU4 736 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 FAM167BQ9BTA0 163 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 DPEP3Q9H4B8 488 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 SIX4Q9UIU6 781 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 PLXNA1Q9UIW2 1896 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 O00370 1275 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 SLC26A4O43511 780 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 MGRN1O60291 552 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 GNAT1P11488 350 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 LMO2P25791 158 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 HPDP32754 393 aaPredicted RBP13.9□□□□□ -0.18
TOP3B-202ENST00000398793 ELF3P78545 371 aaPredicted RBP13.9□□□□□ -0.18
TOP3B-202ENST00000398793 CWF19L1Q69YN2 538 aaKnown RBP13.9□□□□□ -0.18
TOP3B-202ENST00000398793 DPY19L2P1Q6NXN4 242 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 RHOBTB2Q9BYZ6 727 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 TSGA10Q9BZW7 698 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 SDCBP2Q9H190 292 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 PAPOLBQ9NRJ5 636 aaKnown RBP13.9□□□□□ -0.18
TOP3B-202ENST00000398793 PCDHB2Q9Y5E7 798 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 PCDHGC5Q9Y5F6 944 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 CEP104O60308 925 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 PPFIA2O75334 1257 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 B3GAT3O94766 335 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 LDHAP00338 332 aaKnown RBP13.89□□□□□ -0.19
TOP3B-202ENST00000398793 FESP07332 822 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 CLTAP09496 248 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 BRCC3P46736 316 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 RNASELQ05823 741 aaKnown RBP13.89□□□□□ -0.19
TOP3B-202ENST00000398793 MEA1Q16626 185 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 TSHZ1Q6ZSZ6 1077 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 HAUS1Q96CS2 278 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 TSC22D3Q99576 134 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 EBF2Q9HAK2 575 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 CORO1CQ9ULV4 474 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-202ENST00000398793 TRIOO75962 3097 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 A0A1W2PQ45 241 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-202ENST00000398793 A0A1W2PQY0 241 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 SMIM24O75264 130 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 ACRP10323 421 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 RRM1P23921 792 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 TNNC1P63316 161 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 MCL1Q07820 350 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 ZNF570Q96NI8 536 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
TOP3B-202ENST00000398793 HEMGNQ9BXL5 484 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 TMEM134Q9H6X4 195 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 TNFSF13BQ9Y275 285 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 CITO14578 2027 aa13.89□□□□□ -0.19
TOP3B-202ENST00000398793 ESYT3A0FGR9 886 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 TACC1O75410 805 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 FERP16591 822 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
TOP3B-202ENST00000398793 PAK2Q13177 524 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 XRCC4Q13426 336 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ALS2CLQ60I27 953 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 KAZNQ674X7 775 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
TOP3B-202ENST00000398793 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 DMGDHQ9UI17 866 aaKnown RBP13.88□□□□□ -0.19
TOP3B-202ENST00000398793 TRIP11Q15643 1979 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 KBTBD13C9JR72 458 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 PDE2AO00408 941 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ABLIM1O14639 778 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 DIAPH2O60879 1101 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 CCDC130P13994 396 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 MRPS6P82932 125 aaKnown RBP13.88□□□□□ -0.19
TOP3B-202ENST00000398793 SLC27A1Q6PCB7 646 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 GPR152Q8TDT2 470 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 EPAS1Q99814 870 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ST6GALNAC4Q9H4F1 302 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms