RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 KRT10P13645 584 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 ETS1P14921 441 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 GCNT1Q02742 428 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 FASTKD3Q14CZ7 662 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 RHOT1Q8IXI2 618 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 FAM81BQ96LP2 452 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 CIDEBQ9UHD4 219 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 LNPEPQ9UIQ6 1025 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 PHTF1Q9UMS5 762 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF536O15090 1300 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 ASMTLO95671 621 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 CCNE2O96020 404 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 KLRC2P26717 231 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 GCAP28676 217 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 DSG3P32926 999 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 PSMC5P62195 406 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 ATP13A4Q4VNC1 1196 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 PCNX4Q63HM2 1172 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 MON1BQ7L1V2 547 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 TRABD2AQ86V40 505 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 C4orf19Q8IY42 314 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 ZCCHC9Q8N567 271 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 TRABDQ9H4I3 376 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 ACTL7BQ9Y614 415 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 ICAM1P05362 532 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 LYNP07948 512 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 KRT15P19012 456 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 CAP2P40123 477 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 MAP3K10Q02779 954 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 PKN2Q16513 984 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 CEP128Q6ZU80 1094 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 NIM1KQ8IY84 436 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 CLEC4DQ8WXI8 215 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 TRIM11Q96F44 468 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 IL1RAPL1Q9NZN1 696 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 GRID1Q9ULK0 1009 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 PCDHB2Q9Y5E7 798 aa16.8■□□□□ 0.28
CHMP1A-201ENST00000397901 PSTPIP1O43586 416 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 CYP1A1P04798 512 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 CCDC166P0CW27 439 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 CXCL9Q07325 125 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 LIN52Q52LA3 116 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 ANO5Q75V66 913 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 USP37Q86T82 979 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 GPD1LQ8N335 351 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 FBXL18Q96ME1 805 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 CFAP57Q96MR6 1250 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 TAAR1Q96RJ0 339 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF184Q99676 751 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 VPS37BQ9H9H4 285 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 DDX43Q9NXZ2 648 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 DNPEPQ9ULA0 475 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 CAPN9O14815 690 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 MAGEB2O15479 319 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 TMCC1O94876 653 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 TCF4P15884 667 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 ATF7P17544 494 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 GTF2H1P32780 548 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 USP46P62068 366 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 MOGSQ13724 837 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 LIN9Q5TKA1 542 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 ENOSF1Q7L5Y1 443 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 KATNAL2Q8IYT4 538 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 HIC2Q96JB3 615 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 OLFM3Q96PB7 478 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 TMEM165Q9HC07 324 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 TBC1D22BQ9NU19 505 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF148Q9UQR1 794 aa16.79■□□□□ 0.28
CHMP1A-201ENST00000397901 CBX6O95503 412 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 RPA3P35244 121 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 PTP4A2Q12974 167 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 MAMLD1Q13495 774 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 SPARCL1Q14515 664 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 NIPA1Q7RTP0 329 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 RELL1Q8IUW5 271 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 RIBC1Q8N443 379 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 SYTL5Q8TDW5 730 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 HAUS1Q96CS2 278 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 SAR1AQ9NR31 198 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF212Q9UDV6 495 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 WNT10BO00744 389 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 TLR3O15455 904 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 PFDN1O60925 122 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 PSMG1O95456 288 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 ABHD2P08910 425 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 UBTFL6P0CB48 400 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 TNNI1P19237 187 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 ARSEP51690 589 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 WNT7BP56706 349 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 GPS1Q13098 491 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 RFWD3Q6PCD5 774 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 SLC16A10Q8TF71 515 aa16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 RAVER2Q9HCJ3 691 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 STX18Q9P2W9 335 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-201ENST00000397901 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms