RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CDR2Q01850 454 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 GFPT1Q06210 699 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 ORC1Q13415 861 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 WSCD1Q658N2 575 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 OSTM1Q86WC4 334 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 ZNF677Q86XU0 584 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 GLYCTKQ8IVS8 523 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 TMEM86AQ8N2M4 240 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 ACRBPQ8NEB7 543 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 TMEM176AQ96HP8 235 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 UHRF1Q96T88 793 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 ZSWIM1Q9BR11 485 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 ADGRG1Q9Y653 693 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 TNFRSF10AO00220 468 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 ALDH2P05091 517 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 MMEP08473 750 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 ODC1P11926 461 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 TNFAIP3P21580 790 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 BCAR1P56945 870 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 BTG3Q14201 252 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 COL19A1Q14993 1142 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 TCEAL5Q5H9L2 206 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 TAF3Q5VWG9 929 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 VPS36Q86VN1 386 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 OR6B3Q8NGW1 331 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 ZNF606Q8WXB4 792 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 TFAP2BQ92481 460 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 COLEC11Q9BWP8 271 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 NT5C1AQ9BXI3 368 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 UBE2ZQ9H832 354 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 ADAM28Q9UKQ2 775 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 FAN1Q9Y2M0 1017 aa18.02■□□□□ 0.48
TSPAN4-205ENST00000397406 THAP12O43422 761 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 HCRTO43612 131 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 LMO2P25791 158 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 GNL1P36915 607 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 CYP27A1Q02318 531 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 PALB2Q86YC2 1186 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 SPATA18Q8TC71 538 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 PCDHB18PQ96TA0 734 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 SNX25Q9H3E2 840 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 KCND1Q9NSA2 647 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 NAGPAQ9UK23 515 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 PCDHB8Q9UN66 801 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 TIMM13Q9Y5L4 95 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 NLRC5Q86WI3 1866 aa18.01■□□□□ 0.47
TSPAN4-205ENST00000397406 A8MXQ7 604 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 TADA2AO75478 443 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 RB1P06400 928 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 VDRP11473 427 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 TYMPP19971 482 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 BRD2P25440 801 aaKnown RBP18■□□□□ 0.47
TSPAN4-205ENST00000397406 PBX3P40426 434 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 CRYBG2Q8N1P7 616 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 DPEP3Q9H4B8 488 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 ALG13Q9NP73 1137 aaKnown RBP18■□□□□ 0.47
TSPAN4-205ENST00000397406 CD320Q9NPF0 282 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 PUF60Q9UHX1 559 aaKnown RBP18■□□□□ 0.47
TSPAN4-205ENST00000397406 PPP2R2CQ9Y2T4 447 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 ATG2AQ2TAZ0 1938 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 BRWD1Q9NSI6 2320 aa18■□□□□ 0.47
TSPAN4-205ENST00000397406 ARHGEF37A1IGU5 675 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 NT5C1B-RDH14C9J2C7 533 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 TRAPPC3O43617 180 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 EFEMP2O95967 443 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 CFHP08603 1231 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 CCDC175P0C221 793 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.475e-7■■■■■ 36.5
TSPAN4-205ENST00000397406 LHX1P48742 406 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 ACOT1Q86TX2 421 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 TMEM173Q86WV6 379 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 CCAR2Q8N163 923 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 C17orf53Q8N3J3 647 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 BCL7CQ8WUZ0 217 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 HEXIM2Q96MH2 286 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 RTP3Q9BQQ7 232 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 DDX43Q9NXZ2 648 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 DSEQ9UL01 958 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 KIAA1257Q9ULG3 409 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 PCDHGC3Q9UN70 934 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 TCF20Q9UGU0 1960 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 PTPRDP23468 1912 aa17.99■□□□□ 0.47
TSPAN4-205ENST00000397406 USP27XA6NNY8 438 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 IPO7O95373 1038 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 PDGFRBP09619 1106 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 CD19P15391 556 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 IRS1P35568 1242 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 LTBRP36941 435 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 ALDH7A1P49419 539 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 KRT83P78385 493 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 SPA17Q15506 151 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 ALKBH5Q6P6C2 394 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 SPPL3Q8TCT6 385 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 KHSRPQ92945 711 aaKnown RBP eCLIP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 GPR62Q9BZJ7 368 aa17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 SEPT11Q9NVA2 429 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-205ENST00000397406 TAS2R14Q9NYV8 317 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms