RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 LHX5Q9H2C1 402 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 DPEP3Q9H4B8 488 aa25.02■■□□□ 1.6
TSPAN4-202ENST00000397396 A0A087X0T9 212 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 LINC01553A4QN01 128 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 DDX3XO00571 662 aaKnown RBP eCLIP25.01■■□□□ 1.591e-6■■■■□ 19.5
TSPAN4-202ENST00000397396 ZSCAN12O43309 604 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 FGF18O76093 207 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 FAM228BP0C875 321 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 CHRNB2P17787 502 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 CTNNB1P35222 781 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 BMPR1AP36894 532 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 SLC8A3P57103 927 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 GFPT1Q06210 699 aaPredicted RBP25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 MTF1Q14872 753 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 CTXN3Q4LDR2 81 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 TMEM35BQ8NCS4 154 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 LNX1Q8TBB1 728 aaPredicted RBP25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 MYCBPAPQ8TBZ2 947 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 TFAP2BQ92481 460 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 CYFIP2Q96F07 1278 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 SPTLC3Q9NUV7 552 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 NAGPAQ9UK23 515 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 LZTS1Q9Y250 596 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 NME7Q9Y5B8 376 aa25.01■■□□□ 1.59
TSPAN4-202ENST00000397396 KIAA1671Q9BY89 1806 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 CYP1A1P04798 512 aaPredicted RBP25■■□□□ 1.59
TSPAN4-202ENST00000397396 URODP06132 367 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 RB1P06400 928 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 LINC00271P0C7V0 271 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 SETSIPP0DME0 302 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 ACAT1P24752 427 aaKnown RBP25■■□□□ 1.59
TSPAN4-202ENST00000397396 GLUD2P49448 558 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 C4orf50Q6ZRC1 276 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 MSANTD4Q8NCY6 345 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 NOX5Q96PH1 765 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 HNRNPABQ99729 332 aaKnown RBP25■■□□□ 1.59
TSPAN4-202ENST00000397396 RTP3Q9BQQ7 232 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 CHST7Q9NS84 486 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 MSRAQ9UJ68 235 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 TSPAN16Q9UKR8 245 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 BACE2Q9Y5Z0 518 aa25■■□□□ 1.59
TSPAN4-202ENST00000397396 CDH5P33151 784 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 PSMC1P62191 440 aaKnown RBP24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 DSG1Q02413 1049 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 UBE3AQ05086 875 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 NFE2Q16621 373 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 CLEC16AQ2KHT3 1053 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 GOLGA7BQ2TAP0 167 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 MDH1BQ5I0G3 518 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 CCDC122Q5T0U0 273 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 TRIM11Q96F44 468 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 C11orf84Q9BUA3 381 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 ZCWPW1Q9H0M4 648 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 FAM49BQ9NUQ9 324 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 ADGRG1Q9Y653 693 aa24.99■■□□□ 1.59
TSPAN4-202ENST00000397396 LCHNA4D1U4 455 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 C5orf67F2Z3F1 127 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 M0QYV0 167 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 RTN2O75298 545 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 MICAL2O94851 1124 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 NSFP46459 744 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 RABGGTBP53611 331 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 BCAT1P54687 386 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 RTP2Q5QGT7 225 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 PPP1R26Q5T8A7 1209 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 FAM171BQ6P995 826 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 TOGARAM2Q6ZUX3 1019 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 TDHQ8IZJ6 230 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 C12orf29Q8N999 325 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 OR10T2Q8NGX3 314 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 OLIG1Q8TAK6 271 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 TGS1Q96RS0 853 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 MIS12Q9H081 205 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 MTRRQ9UBK8 725 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 INTUQ9ULD6 942 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 NENFQ9UMX5 172 aa24.98■■□□□ 1.59
TSPAN4-202ENST00000397396 HCRTO43612 131 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 MAGEA1P43355 309 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 SNX16P57768 344 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 NOMO3P69849 1222 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 CENPCQ03188 943 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 PSMD5Q16401 504 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 KIAA1328Q86T90 577 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 ANKRD52Q8NB46 1076 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 KLHL23Q8NBE8 558 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 SLC2A14Q8TDB8 520 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 RIN2Q8WYP3 895 aaPredicted RBP24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 ZSWIM1Q9BR11 485 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 MED10Q9BTT4 135 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 VN1R3Q9BXE9 311 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 CRTAC1Q9NQ79 661 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 MRPL17Q9NRX2 175 aaKnown RBP24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 PYCARDQ9ULZ3 195 aa24.97■■□□□ 1.59
TSPAN4-202ENST00000397396 GOLGA6L9A6NEM1 432 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 CALCAP01258 141 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 UNGP13051 313 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 BST2Q10589 180 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 ACAD10Q6JQN1 1059 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 ZSCAN30Q86W11 494 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms