RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CAPN8A6NHC0 703 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 M0QZQ0 153 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 ABLIM1O14639 778 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 DTNBO60941 627 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 FGF19O95750 216 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 ITPKAP23677 461 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 MARCKSP29966 332 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-203ENST00000397378 EPHB3P54753 998 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 OSTNP61366 133 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 YWHAHQ04917 246 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-203ENST00000397378 GPR17Q13304 367 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 GAREM2Q75VX8 874 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 NAXDQ8IW45 347 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 DIS3L2Q8IYB7 885 aaKnown RBP10.25□□□□□ -0.77
NEDD9-203ENST00000397378 CEP76Q8TAP6 659 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 FCRL3Q96P31 734 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-203ENST00000397378 PGLYRP2Q96PD5 576 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 MRPL4Q9BYD3 311 aaKnown RBP10.25□□□□□ -0.77
NEDD9-203ENST00000397378 CRISPLD1Q9H336 500 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 ARHGAP28Q9P2N2 729 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 PILRBQ9UKJ0 227 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-203ENST00000397378 PTPRDP23468 1912 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 GON4LQ3T8J9 2241 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 PCDH15Q96QU1 1955 aa10.25□□□□□ -0.77
NEDD9-203ENST00000397378 SCN1AP35498 2009 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 SERPINF2P08697 491 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 ARSAP15289 507 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 ITPKBP27987 946 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 MCM7P33993 719 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 HOXD12P35452 270 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 ALDH1A3P47895 512 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 NPTX2P47972 431 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 AARSP49588 968 aaKnown RBP eCLIP10.24□□□□□ -0.77
NEDD9-203ENST00000397378 CYP4F8P98187 520 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 DUSP4Q13115 394 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 HAUS3Q68CZ6 603 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 CENPPQ6IPU0 288 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 MPZL3Q6UWV2 235 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 TAS1R3Q7RTX0 852 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 TMPRSS7Q7RTY8 843 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 DNAJB7Q7Z6W7 309 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-203ENST00000397378 SLCO6A1Q86UG4 719 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 MARCH9Q86YJ5 346 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 FRMD1Q8N878 549 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 EZH1Q92800 747 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-203ENST00000397378 CD101Q93033 1021 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 PSMG2Q969U7 264 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 FNBP1Q96RU3 617 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 FAM83CQ9BQN1 747 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 TARS2Q9BW92 718 aaKnown RBP10.24□□□□□ -0.77
NEDD9-203ENST00000397378 BHMT2Q9H2M3 363 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 PRORYQ9H606 182 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 TASP1Q9H6P5 420 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 POLD4Q9HCU8 107 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 DNAAF2Q9NVR5 837 aaKnown RBP10.24□□□□□ -0.77
NEDD9-203ENST00000397378 HSFX1Q9UBD0 423 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
NEDD9-203ENST00000397378 CEP192Q8TEP8 1941 aa10.24□□□□□ -0.77
NEDD9-203ENST00000397378 MUC22E2RYF6 1773 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-203ENST00000397378 CCDC169A6NNP5 214 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 ARHGAP33O14559 1287 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 ALDH1A2O94788 518 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 SYPP08247 313 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 LRPAP1P30533 357 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 GJA4P35212 333 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 P2RY2P41231 377 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 SEC13P55735 322 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 PEX3P56589 373 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 SLC14A1Q13336 389 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 ORC2Q13416 577 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-203ENST00000397378 MYBPC2Q14324 1141 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 ECM1Q16610 540 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 SLC10A6Q3KNW5 377 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 C2orf27AQ580R0 203 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 PEAR1Q5VY43 1037 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-203ENST00000397378 CC2D1AQ6P1N0 951 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-203ENST00000397378 LRRC69Q6ZNQ3 347 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 GCNAQ96QF7 691 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 ARID3AQ99856 593 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 TCHPQ9BT92 498 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 PLEKHA5Q9HAU0 1116 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 CAPN10Q9HC96 672 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 BCCIPQ9P287 314 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD9-203ENST00000397378 ZMYM5Q9UJ78 669 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 ANAPC1Q9H1A4 1944 aa10.23□□□□□ -0.77
NEDD9-203ENST00000397378 MTMR11A4FU01 709 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 TOM1L1O75674 476 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 OR4Q2P0C623 313 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 OR52Z1P0C646 297 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 TYMPP19971 482 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 SRSF1Q07955 248 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEDD9-203ENST00000397378 BFSP1Q12934 665 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 DMP1Q13316 513 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-203ENST00000397378 TRIM29Q14134 588 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 NOLC1Q14978 699 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEDD9-203ENST00000397378 ANKRD1Q15327 319 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 ZBTB6Q15916 424 aa10.22□□□□□ -0.77
NEDD9-203ENST00000397378 RABEPKQ7Z6M1 372 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms