RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 CCDC142Q17RM4 750 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 PUS10Q3MIT2 529 aaKnown RBP17.21■□□□□ 0.35
RBM39-205ENST00000397370 PTCRAQ6ISU1 281 aaPredicted RBP17.21■□□□□ 0.35
RBM39-205ENST00000397370 GBP6Q6ZN66 633 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 GPR149Q86SP6 731 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 UNC93AQ86WB7 457 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.21■□□□□ 0.35
RBM39-205ENST00000397370 TTC9BQ8N6N2 239 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 SPPL2BQ8TCT7 592 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 ZNF707Q96C28 371 aaPredicted RBP17.21■□□□□ 0.35
RBM39-205ENST00000397370 ARID3AQ99856 593 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 CRACR2AQ9BSW2 395 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 PRKD2Q9BZL6 878 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 INTS2Q9H0H0 1204 aaKnown RBP17.21■□□□□ 0.35
RBM39-205ENST00000397370 DPEP3Q9H4B8 488 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 ABI2Q9NYB9 513 aaPredicted RBP17.21■□□□□ 0.35
RBM39-205ENST00000397370 TAB2Q9NYJ8 693 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 HSFX1Q9UBD0 423 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 SLC27A5Q9Y2P5 690 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 USP15Q9Y4E8 981 aaPredicted RBP17.21■□□□□ 0.35
RBM39-205ENST00000397370 PCDHB5Q9Y5E4 795 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 INSL5Q9Y5Q6 135 aa17.21■□□□□ 0.35
RBM39-205ENST00000397370 CCL16O15467 120 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 CAVIN2O95810 425 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
RBM39-205ENST00000397370 CD58P19256 250 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 TBXAS1P24557 533 aaPredicted RBP17.2■□□□□ 0.34
RBM39-205ENST00000397370 CUL2Q13617 745 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 MAPRE1Q15691 268 aaKnown RBP17.2■□□□□ 0.34
RBM39-205ENST00000397370 CYP26C1Q6V0L0 522 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 SUSD6Q92537 303 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 SMG7Q92540 1137 aaKnown RBP17.2■□□□□ 0.34
RBM39-205ENST00000397370 ASB2Q96Q27 587 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 LPIN3Q9BQK8 851 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 RHOBTB2Q9BYZ6 727 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 FAM124BQ9H5Z6 455 aaPredicted RBP17.2■□□□□ 0.34
RBM39-205ENST00000397370 CBX8Q9HC52 389 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 CISHQ9NSE2 258 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 HMGXB4Q9UGU5 601 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 LIMA1Q9UHB6 759 aaKnown RBP17.2■□□□□ 0.34
RBM39-205ENST00000397370 CDH22Q9UJ99 828 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 YIPF1Q9Y548 306 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 MYH10P35580 1976 aa17.2■□□□□ 0.34
RBM39-205ENST00000397370 DENND4AQ7Z401 1863 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 BECN2A8MW95 431 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 PES1O00541 588 aaKnown RBP17.19■□□□□ 0.34
RBM39-205ENST00000397370 CILPO75339 1184 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 LRG1P02750 347 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 TPM2P07951 284 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 POU2F2P09086 479 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 HAPLN1P10915 354 aaPredicted RBP17.19■□□□□ 0.34
RBM39-205ENST00000397370 SLC9A1P19634 815 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 CDK11BP21127 795 aaKnown RBP17.19■□□□□ 0.34
RBM39-205ENST00000397370 MTHFRP42898 656 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 TUFMP49411 452 aaKnown RBP17.19■□□□□ 0.34
RBM39-205ENST00000397370 TWF1Q12792 350 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 EXOC3L4Q17RC7 722 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 MGAT5BQ3V5L5 792 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 MDH1BQ5I0G3 518 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 ATAT1Q5SQI0 421 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 C4orf50Q6ZRC1 276 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 ACOT1Q86TX2 421 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 SPATA2LQ8IUW3 424 aaPredicted RBP17.19■□□□□ 0.34
RBM39-205ENST00000397370 ARHGEF19Q8IW93 802 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 CRYBG2Q8N1P7 616 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 PPM1KQ8N3J5 372 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 TTC39CQ8N584 583 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 ANKRD20A12PQ8NF67 263 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 MYLPFQ96A32 169 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 TNIP3Q96KP6 325 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 RIPOR3Q96MK2 946 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 TWNKQ96RR1 684 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 VPS16Q9H269 839 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 PIDD1Q9HB75 910 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 ABCB6Q9NP58 842 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 FAM50BQ9Y247 325 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 NOTCH4Q99466 2003 aa17.19■□□□□ 0.34
RBM39-205ENST00000397370 XYLBO75191 536 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 SOAT2O75908 522 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 ATP1A3P13637 1013 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 IL9P15248 144 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 PON1P27169 355 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 COPB1P53618 953 aaKnown RBP17.18■□□□□ 0.34
RBM39-205ENST00000397370 YWHAEP62258 255 aaKnown RBP17.18■□□□□ 0.34
RBM39-205ENST00000397370 ORC1Q13415 861 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 CBX2Q14781 532 aaPredicted RBP17.18■□□□□ 0.34
RBM39-205ENST00000397370 SMAD2Q15796 467 aaKnown RBP17.18■□□□□ 0.34
RBM39-205ENST00000397370 PHLDB3Q6NSJ2 640 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 TRIM65Q6PJ69 517 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 LRSAM1Q6UWE0 723 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 PCED1BQ96HM7 432 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 FUBP3Q96I24 572 aaKnown RBP eCLIP17.18■□□□□ 0.34
RBM39-205ENST00000397370 NECTIN4Q96NY8 510 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 SEPT5Q99719 369 aaPredicted RBP17.18■□□□□ 0.34
RBM39-205ENST00000397370 NT5C1AQ9BXI3 368 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 ELOVL4Q9GZR5 314 aa17.18■□□□□ 0.34
RBM39-205ENST00000397370 SPTBN5Q9NRC6 3674 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms