RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CARNS1A5YM72 827 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 M0QZQ0 153 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 TULP2O00295 520 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 MOCS3O95396 460 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 ITGB1P05556 798 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 FERP16591 822 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 TCP1P17987 556 aaKnown RBP15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 ANXA13P27216 316 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 PRKCIP41743 596 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 RAP1GAPP47736 663 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 RGS19P49795 217 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 CDH8P55286 799 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 BCAR1P56945 870 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 C2orf54Q08AI8 447 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 TIGD5Q53EQ6 642 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 C9orf50Q5SZB4 431 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 SUSD3Q96L08 255 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 SENP8Q96LD8 212 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 GDF15Q99988 308 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 COLEC11Q9BWP8 271 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 PRG3Q9Y2Y8 225 aaPredicted RBP15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 HYOU1Q9Y4L1 999 aa15.77■□□□□ 0.12
TM9SF1-202ENST00000396854 F8W810 466 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 CYB561D2O14569 222 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 HUS1O60921 280 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 SYF2O95926 243 aaKnown RBP15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 MAGEA1P43355 309 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 TNNT3P45378 269 aaPredicted RBP15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 ZNF132P52740 706 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 TDRD12Q587J7 1177 aaKnown RBP15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 IRF2BP2Q7Z5L9 587 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 APPL2Q8NEU8 664 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 SPATA18Q8TC71 538 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 RAD9AQ99638 391 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 CWC15Q9P013 229 aaKnown RBP15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 ADAM28Q9UKQ2 775 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 PCDHB4Q9Y5E5 795 aa15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 BZW2Q9Y6E2 419 aaKnown RBP15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 MRPL42Q9Y6G3 142 aaKnown RBP15.77■□□□□ 0.11
TM9SF1-202ENST00000396854 CILPO75339 1184 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 GFPT2O94808 682 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 CCDC172P0C7W6 258 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 CD58P19256 250 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 BRCC3P46736 316 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 DSTYKQ6XUX3 929 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 TMEM86AQ8N2M4 240 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 HASPINQ8TF76 798 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 KBTBD7Q8WVZ9 684 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 OSBPL9Q96SU4 736 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 MRPL45Q9BRJ2 306 aaKnown RBP15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 ZBED2Q9BTP6 218 aa15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 BARX2Q9UMQ3 279 aaPredicted RBP15.76■□□□□ 0.11
TM9SF1-202ENST00000396854 ARHGEF37A1IGU5 675 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 RNF40O75150 1001 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 CYP11A1P05108 521 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 ODC1P11926 461 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 KRT5P13647 590 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 LAG3P18627 525 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 WARSP23381 471 aaKnown RBP15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 ALDH7A1P49419 539 aaKnown RBP15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 KLHL30Q0D2K2 578 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 SHHQ15465 462 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 TMEM270Q6UE05 265 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 ADGRF2Q8IZF7 708 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 RNF10Q8N5U6 811 aaKnown RBP15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 RBBP8NLQ8NC74 664 aaPredicted RBP15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 AENQ8WTP8 325 aaKnown RBP15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 RNPC3Q96LT9 517 aaKnown RBP15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 SELENOOQ9BVL4 669 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 TNRC18O15417 2968 aaPredicted RBP15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 CYP26A1O43174 497 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 TRAPPC3O43617 180 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 TADA2AO75478 443 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 LINC00271P0C7V0 271 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 MYBL2P10244 700 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 USP8P40818 1118 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 KCNT2Q6UVM3 1135 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 LEKR1Q6ZMV7 388 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 UNC93AQ86WB7 457 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 WHAMMQ8TF30 809 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 FAM204AQ9H8W3 233 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 DSEQ9UL01 958 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 PCDHB8Q9UN66 801 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 ATP8B3O60423 1300 aa15.75■□□□□ 0.11
TM9SF1-202ENST00000396854 GABRDO14764 452 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 TLL1O43897 1013 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 EFEMP2O95967 443 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 TYMPP19971 482 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 TMEM173Q86WV6 379 aaPredicted RBP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 FIBCD1Q8N539 461 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 SPATA4Q8NEY3 305 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 CLP1Q92989 425 aaKnown RBP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 ZNF558Q96NG5 402 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 NME7Q9Y5B8 376 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 SF3B1O75533 1304 aaKnown RBP eCLIP15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 NT5C1B-RDH14C9J2C7 533 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 H0YGN5 161 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 I3L4J1 428 aa15.74■□□□□ 0.11
TM9SF1-202ENST00000396854 SYN3O14994 580 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms