RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 USP27XA6NNY8 438 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 CHL1O00533 1208 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 CDC16Q13042 620 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 NRDE2Q9H7Z3 1164 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 MCM8Q9UJA3 840 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 YWHAQP27348 245 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ITGA1P56199 1179 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 PTK6Q13882 451 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 NANOGNBQ7Z5D8 188 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF333Q96JL9 665 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 L3MBTL3Q96JM7 780 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF341Q9BYN7 854 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 OSBPL5Q9H0X9 879 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 GCP02774 474 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 SNX30Q5VWJ9 437 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ERAP2Q6P179 960 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ULK3Q6PHR2 472 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 RIBC1Q8N443 379 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 RBBP8NLQ8NC74 664 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 MRPL4Q9BYD3 311 aaKnown RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 WWOXQ9NZC7 414 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 MAP3K19Q56UN5 1328 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 JAK1P23458 1154 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 CCT8P50990 548 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 PURAQ00577 322 aaKnown RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 BNC2Q6ZN30 1099 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 YAF2Q8IY57 180 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 CAPSLQ8WWF8 208 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 CLRN2A0PK11 232 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 NQO1P15559 274 aaKnown RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 MYL12AP19105 171 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 PSMB9P28065 219 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ITIH4Q14624 930 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 FAR2Q96K12 515 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 CD209Q9NNX6 404 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 TLR7Q9NYK1 1049 aaKnown RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 EIF3LQ9Y262 564 aaKnown RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 VPS9D1Q9Y2B5 631 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 COQ6Q9Y2Z9 468 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 NCAPD2Q15021 1401 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 CCDC182A6NF36 153 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 MTFR1Q15390 333 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 FAM83EQ2M2I3 478 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 SHCBP1LQ9BZQ2 653 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 RNF112Q9ULX5 631 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 QRICH2Q9H0J4 1663 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 EMSYQ7Z589 1322 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 F8VZ95 297 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 NR5A2O00482 541 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 C21orf59P57076 290 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 STX5Q13190 355 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 MAP4K1Q92918 833 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 EAF2Q96CJ1 260 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 PNMA3Q9UL41 463 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 SLC39A10Q9ULF5 831 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 PCDHGA4Q9Y5G9 962 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 FAM200BP0CF97 657 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 TFE3P19532 575 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ZCCHC7Q8N3Z6 543 aaKnown RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 ILKAPQ9H0C8 392 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 RGS18Q9NS28 235 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 PIK3CDO00329 1044 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 TNFRSF21O75509 655 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 LBPP18428 481 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 SERPINB8P50452 374 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 MARCH10Q8NA82 808 aaPredicted RBP10.72□□□□□ -0.69
COL4A4-201ENST00000396625 TRAPPC9Q96Q05 1148 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 COPG2Q9UBF2 871 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 PCDHGA3Q9Y5H0 932 aa10.72□□□□□ -0.69
COL4A4-201ENST00000396625 A8MXQ7 604 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 FAM20BO75063 409 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 MYCP01106 439 aaPredicted RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 CLTBP09497 229 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 MAPK1P28482 360 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 PTPN7P35236 360 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 AVPR1AP37288 418 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 QARSP47897 775 aaKnown RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 FCHO2Q0JRZ9 810 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 FBXO42Q6P3S6 717 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 TMC4Q7Z404 712 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 SLC35G2Q8TBE7 412 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 FRMD6Q96NE9 622 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 RBAKQ9NYW8 714 aaPredicted RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 SNRPAP09012 282 aaKnown RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 GEMIN4P57678 1058 aaKnown RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 RESTQ13127 1097 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 SUGP1Q8IWZ8 645 aaKnown RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 SLC9A7Q96T83 725 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 USP17L3A6NCW0 530 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 USP17L4A6NCW7 530 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 CIAO1O76071 339 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 STARP49675 285 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 VEPH1Q14D04 833 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 USP17L1Q7RTZ2 530 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 GPD1LQ8N335 351 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 MAGED4Q96JG8 741 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms