RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CD101Q93033 1021 aa13.49□□□□□ -0.25
TRIM39-204ENST00000396548 PPP1R12CQ9BZL4 782 aa13.49□□□□□ -0.25
TRIM39-204ENST00000396548 ADAM22Q9P0K1 906 aa13.49□□□□□ -0.25
TRIM39-204ENST00000396548 ATP11BQ9Y2G3 1177 aa13.49□□□□□ -0.25
TRIM39-204ENST00000396548 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
TRIM39-204ENST00000396548 PTPRDP23468 1912 aa13.49□□□□□ -0.25
TRIM39-204ENST00000396548 F8W810 466 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 KIAA0355O15063 1070 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 SRGAP2O75044 1071 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 ITGB1P05556 798 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 CD19P15391 556 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 STILQ15468 1287 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 CREG2Q8IUH2 290 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 TMEM86AQ8N2M4 240 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 OR6B3Q8NGW1 331 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 INPP5FQ9Y2H2 1132 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 VWA8A3KMH1 1905 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 NAP1L1P55209 391 aaKnown RBP13.48□□□□□ -0.25
TRIM39-204ENST00000396548 ZNF572Q7Z3I7 529 aaPredicted RBP13.48□□□□□ -0.25
TRIM39-204ENST00000396548 ZNF564Q8TBZ8 553 aaPredicted RBP13.48□□□□□ -0.25
TRIM39-204ENST00000396548 CPXM1Q96SM3 734 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 OSBPL9Q96SU4 736 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 CTTNBP2NLQ9P2B4 639 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 KANSL3Q9P2N6 904 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 TJP2Q9UDY2 1190 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 PATJQ8NI35 1801 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 A8MXQ7 604 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
TRIM39-204ENST00000396548 GABBR2O75899 941 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 KIF4AO95239 1232 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 SYCE1Q8N0S2 351 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 SLC35F5Q8WV83 523 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 PKMYT1Q99640 499 aa13.48□□□□□ -0.25
TRIM39-204ENST00000396548 PACSIN2Q9UNF0 486 aaPredicted RBP13.48□□□□□ -0.25
TRIM39-204ENST00000396548 COL4A4P53420 1690 aaPredicted RBP13.47□□□□□ -0.25
TRIM39-204ENST00000396548 TIMP1P01033 207 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 CALB1P05937 261 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 PAQR9Q6ZVX9 377 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 DAAM2Q86T65 1068 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 RSPH1Q8WYR4 309 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 TRIM7Q9C029 511 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 TMEM39AQ9NV64 488 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 PCDHB7Q9Y5E2 793 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 CES2O00748 559 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 ZNF185O15231 689 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 ERBB2P04626 1255 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 GATMP50440 423 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 PDCLQ13371 301 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 WHAMMP3Q1A5X7 153 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 GOLGA7BQ2TAP0 167 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 CNKSR3Q6P9H4 555 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 BTBD6Q96KE9 485 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 SNX25Q9H3E2 840 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 DNAJB4Q9UDY4 337 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 ALG6Q9Y672 507 aa13.47□□□□□ -0.25
TRIM39-204ENST00000396548 ATP2C2O75185 946 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 CAPN15O75808 1086 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 SLU7O95391 586 aaKnown RBP13.46□□□□□ -0.25
TRIM39-204ENST00000396548 NECAB2Q7Z6G3 386 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 XYLT1Q86Y38 959 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 CPNE8Q86YQ8 564 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 NPAS4Q8IUM7 802 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 B3GALNT2Q8NCR0 500 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 UBA3Q8TBC4 463 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 URGCPQ8TCY9 931 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 HYOU1Q9Y4L1 999 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 M0QYV0 167 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 PDE2AO00408 941 aaPredicted RBP13.46□□□□□ -0.25
TRIM39-204ENST00000396548 EFEMP2O95967 443 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 TKTP29401 623 aaKnown RBP13.46□□□□□ -0.25
TRIM39-204ENST00000396548 BRCC3P46736 316 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 LHX1P48742 406 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRIM39-204ENST00000396548 MCRS1Q96EZ8 462 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
TRIM39-204ENST00000396548 SLC4A5Q9BY07 1137 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 PRDM10Q9NQV6 1147 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 PARVAQ9NVD7 372 aa13.46□□□□□ -0.25
TRIM39-204ENST00000396548 TMEM191CA6NGB0 347 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 TULP2O00295 520 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 B3GAT3O94766 335 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 CCDC130P13994 396 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 PTPN1P18031 435 aaKnown RBP13.46□□□□□ -0.26
TRIM39-204ENST00000396548 ZNF252P-AS1Q0IIN9 211 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 CCDC142Q17RM4 750 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 LIN9Q5TKA1 542 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 ERICH1Q86X53 443 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 ANKRD52Q8NB46 1076 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 C3orf20Q8ND61 904 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 STK32AQ8WU08 396 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 CARD6Q9BX69 1037 aa13.46□□□□□ -0.26
TRIM39-204ENST00000396548 MCOLN1Q9GZU1 580 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms