RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TRIM11Q96F44 468 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 NOX5Q96PH1 765 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 TSPAN16Q9UKR8 245 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 MKI67P46013 3256 aaKnown RBP21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 TRAPPC3O43617 180 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 FGBP02675 491 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 ACAT1P24752 427 aaKnown RBP21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 SLC11A1P49279 550 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 FAM117BQ6P1L5 589 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 PHF13Q86YI8 300 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 MCOLN2Q8IZK6 566 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 B3GALNT2Q8NCR0 500 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 RFFLQ8WZ73 363 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 ARHGEF26Q96DR7 871 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 WDR24Q96S15 920 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 LPIN3Q9BQK8 851 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 PCDHB8Q9UN66 801 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 COL4A6Q14031 1691 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 PSMC1P62191 440 aaKnown RBP21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 IFI16Q16666 785 aaKnown RBP21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 GOLGA7BQ2TAP0 167 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 ARHGAP17Q68EM7 881 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 MON1BQ7L1V2 547 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 C16orf59Q7L2K0 433 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 TMCO2Q7Z6W1 182 aaPredicted RBP21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 WDTC1Q8N5D0 677 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 ALS2CR12Q96Q35 445 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 C11orf70Q9BRQ4 267 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 ADAM22Q9P0K1 906 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 GTF3C4Q9UKN8 822 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 ADAM28Q9UKQ2 775 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 CAPN6Q9Y6Q1 641 aa21.65■■□□□ 1.06
VCPKMT-202ENST00000395860 ZBBXA8MT70 800 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 ATMINO43313 823 aaPredicted RBP21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 MYBL1P10243 752 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 TYMPP19971 482 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 CASQ1P31415 396 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 ZNF365Q70YC5 407 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 RHOT2Q8IXI1 618 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 TRIM58Q8NG06 486 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 KIF18AQ8NI77 898 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 UBA3Q8TBC4 463 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 SLC35G2Q8TBE7 412 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 VCPIP1Q96JH7 1222 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 HESX1Q9UBX0 185 aa21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 CNOT8Q9UFF9 292 aaKnown RBP21.64■■□□□ 1.06
VCPKMT-202ENST00000395860 ATP2C2O75185 946 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 GALTP07902 379 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 CCDC130P13994 396 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 SYN1P17600 705 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 PTPN1P18031 435 aaKnown RBP21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 PCSK1P29120 753 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 LIN9Q5TKA1 542 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 OVOS1Q6IE37 1185 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 MMS22LQ6ZRQ5 1243 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 ZNF689Q96CS4 500 aaPredicted RBP21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 SYT15Q9BQS2 421 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 CTTNBP2NLQ9P2B4 639 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 CDH9Q9ULB4 789 aa21.64■■□□□ 1.05
VCPKMT-202ENST00000395860 ADORA2BP29275 332 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 BCAR1P56945 870 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 C1QBPQ07021 282 aaKnown RBP21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 C2CD6Q53TS8 623 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 ERICH1Q86X53 443 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 THEM5Q8N1Q8 247 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 OSGEPQ9NPF4 335 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 MARCH5Q9NX47 278 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 VWA8A3KMH1 1905 aa21.63■■□□□ 1.05
VCPKMT-202ENST00000395860 NT5C1B-RDH14C9J2C7 533 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 CYP1A2P05177 515 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 CALB1P05937 261 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 MMP8P22894 467 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 GPD2P43304 727 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 ALDH7A1P49419 539 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 YWHAHQ04917 246 aaPredicted RBP21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 KIAA0319Q5VV43 1072 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 PSRC1Q6PGN9 363 aaPredicted RBP21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 MSANTD4Q8NCY6 345 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 ACBD6Q9BR61 282 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 CWH43Q9H720 699 aa21.62■■□□□ 1.05
VCPKMT-202ENST00000395860 TKTP29401 623 aaKnown RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 PBX3P40426 434 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 MDH1BQ5I0G3 518 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 SPOUT1Q5T280 376 aaKnown RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 TTC30AQ86WT1 665 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 SLC2A14Q8TDB8 520 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 RTP3Q9BQQ7 232 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 NUP85Q9BW27 656 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 RC3H2Q9HBD1 1191 aaKnown RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 CRTAC1Q9NQ79 661 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 CHORDC1Q9UHD1 332 aaPredicted RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 CYTH4Q9UIA0 394 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 ZMYND8Q9ULU4 1186 aaPredicted RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 SF3B1O75533 1304 aaKnown RBP eCLIP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 SYN3O14994 580 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 RRM1P23921 792 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 ELAVL2Q12926 359 aaKnown RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 PTP4A2Q12974 167 aa21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 BTG3Q14201 252 aaPredicted RBP21.61■■□□□ 1.05
VCPKMT-202ENST00000395860 TCEAL1Q15170 157 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms