RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
UBE2D3-208ENST00000394803 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
UBE2D3-208ENST00000394803 SNCAIPQ9Y6H5 919 aa10.56□□□□□ -0.72
UBE2D3-208ENST00000394803 SIP14410 1827 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 MED7O43513 233 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 VNN1O95497 513 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 PAX7P23759 505 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 CDH5P33151 784 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 RFC5P40937 340 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 CTCFP49711 727 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 LBRQ14739 615 aaKnown RBP10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 EMC2Q15006 297 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 ACAP1Q15027 740 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 CCDC6Q16204 474 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 MUM1Q2TAK8 710 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 TAF1BQ53T94 588 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 LGSNQ5TDP6 509 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 ZNF449Q6P9G9 518 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 WDR49Q8IV35 697 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 ASAP3Q8TDY4 903 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 UTP4Q969X6 686 aaKnown RBP10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 MCUR1Q96AQ8 359 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 SLC7A6OSQ96CW6 309 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 PAFAH2Q99487 392 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 BTBD10Q9BSF8 475 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 DHRS4Q9BTZ2 278 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 OSBPL1AQ9BXW6 950 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 MANSC1Q9H8J5 431 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 HOMER2Q9NSB8 354 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 POLIQ9UNA4 740 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 PPME1Q9Y570 386 aa10.55□□□□□ -0.72
UBE2D3-208ENST00000394803 A8MXQ7 604 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 FOXO6A8MYZ6 492 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 PI4K2BG5E9Z4 385 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 HGSO14964 777 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 APBA3O96018 575 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 IFNB1P01574 187 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 MT-ND3P03897 115 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 NR3C2P08235 984 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 SKIP12755 728 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 KRT10P13645 584 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 VHLP40337 213 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 ARFIP2P53365 341 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 ZBTB16Q05516 673 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 KRT72Q14CN4 511 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 SLC1A5Q15758 541 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 NBPF20Q3BBV1 942 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 FAM91A1Q658Y4 838 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 SWSAP1Q6NVH7 229 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 BBS12Q6ZW61 710 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 RTKN2Q8IZC4 609 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 PPFIBP2Q8ND30 876 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 AGBL3Q8NEM8 1001 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 DNAJC9Q8WXX5 260 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 STMN2Q93045 179 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 NSL1Q96IY1 281 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 MCEEQ96PE7 176 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 FAM118BQ9BPY3 351 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 TSSK1BQ9BXA7 367 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 NPHS2Q9NP85 383 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 XPNPEP1Q9NQW7 623 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 SPATS2LQ9NUQ6 558 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 ZMYND8Q9ULU4 1186 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 WDR81Q562E7 1941 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 YDJCA8MPS7 323 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 STBD1O95210 358 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 NEFHP12036 1026 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 GLRA2P23416 452 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 KLC1Q07866 573 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 TBCCQ15814 346 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 SGSM1Q2NKQ1 1148 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 C6orf163Q5TEZ5 329 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 ZPBP2Q6X784 338 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 C3orf62Q6ZUJ4 267 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 TAS1R3Q7RTX0 852 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 TRMT1LQ7Z2T5 733 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 UBR7Q8N806 425 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 BANPQ8N9N5 519 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 SLC7A3Q8WY07 619 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 GMLQ99445 158 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 MAK16Q9BXY0 300 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 NIF3L1Q9GZT8 377 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 IQCGQ9H095 443 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 PORCNQ9H237 461 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 SLCO1B3Q9NPD5 702 aa10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 TNS1Q9HBL0 1735 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-208ENST00000394803 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 A0A0B4J269 797 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 A6NHS1 94 aa10.53□□□□□ -0.72
UBE2D3-208ENST00000394803 KLF11O14901 512 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms