RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 MAPK13O15264 365 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 PARNO95453 639 aaKnown RBP20.35■□□□□ 0.85
CXXC4-201ENST00000394767 SMTNL2Q2TAL5 461 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 SLC39A12Q504Y0 691 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 SLC2A14Q8TDB8 520 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 FAM84AQ96KN4 292 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 TFR2Q9UP52 801 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 FGBP02675 491 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 TKTL1P51854 596 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 DBF4BQ8NFT6 615 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 BHMTQ93088 406 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 SCLYQ96I15 445 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 ZNF518BQ9C0D4 1074 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 SMYD3Q9H7B4 428 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 TSPAN1O60635 241 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 ITGBL1O95965 494 aaPredicted RBP20.35■□□□□ 0.85
CXXC4-201ENST00000394767 NDUFAF2Q8N183 169 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 ATP2A3Q93084 1043 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 FARP1Q9Y4F1 1045 aaPredicted RBP20.35■□□□□ 0.85
CXXC4-201ENST00000394767 COMTP21964 271 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 IGFBP4P22692 258 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 E4F1Q66K89 784 aaPredicted RBP20.35■□□□□ 0.85
CXXC4-201ENST00000394767 RNPC3Q96LT9 517 aaKnown RBP20.35■□□□□ 0.85
CXXC4-201ENST00000394767 LMCD1Q9NZU5 365 aa20.35■□□□□ 0.85
CXXC4-201ENST00000394767 SF3B1O75533 1304 aaKnown RBP eCLIP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 TSHZ1Q6ZSZ6 1077 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 TMEM86AQ8N2M4 240 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 UROC1Q96N76 676 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 NSRP1Q9H0G5 558 aaKnown RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 ALG6Q9Y672 507 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 ATP1A1P05023 1023 aaKnown RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 NFKBIAP25963 317 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 ZNF131P52739 623 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 PURAQ00577 322 aaKnown RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 SPIRE1Q08AE8 756 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 GRIK3Q13003 919 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 PDIK1LQ8N165 341 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 KAT5Q92993 513 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 PAWRQ96IZ0 340 aaKnown RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 GOLPH3Q9H4A6 298 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 DDX60Q8IY21 1712 aaKnown RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 ERICH4A6NGS2 130 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 LGR5O75473 907 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 SETSIPP0DME0 302 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 MYL4P12829 197 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 ZNF571Q7Z3V5 609 aaPredicted RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 ZFP42Q96MM3 310 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 FSD1LQ9BXM9 530 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 MRPL17Q9NRX2 175 aaKnown RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 EFCAB14O75071 495 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 MBL2P11226 248 aaPredicted RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 CYP2C18P33260 490 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 PALB2Q86YC2 1186 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 C1orf54Q8WWF1 131 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 IGFLR1Q9H665 355 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 TTC7AQ9ULT0 858 aaPredicted RBP20.34■□□□□ 0.85
CXXC4-201ENST00000394767 ADAMTS5Q9UNA0 930 aa20.34■□□□□ 0.85
CXXC4-201ENST00000394767 NEMP1O14524 444 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 GIPC1O14908 333 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 RGS16O15492 202 aaPredicted RBP20.33■□□□□ 0.85
CXXC4-201ENST00000394767 TM4SF4P48230 202 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 FAM76AQ8TAV0 307 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 GDAP1Q8TB36 358 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 SKA2Q8WVK7 121 aaPredicted RBP20.33■□□□□ 0.85
CXXC4-201ENST00000394767 DNAJC17Q9NVM6 304 aaKnown RBP20.33■□□□□ 0.85
CXXC4-201ENST00000394767 EEF2KO00418 725 aaKnown RBP20.33■□□□□ 0.85
CXXC4-201ENST00000394767 RCOR2Q8IZ40 523 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 PPM1EQ8WY54 764 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 KCNF1Q9H3M0 494 aa20.33■□□□□ 0.85
CXXC4-201ENST00000394767 POC1B-GALNT4F8VUJ3 575 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 RRM1P23921 792 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 GDF6Q6KF10 455 aaPredicted RBP20.33■□□□□ 0.84
CXXC4-201ENST00000394767 DDX47Q9H0S4 455 aaKnown RBP20.33■□□□□ 0.84
CXXC4-201ENST00000394767 WDCPQ9H6R7 721 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 CRCPO75575 148 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 BDNFP23560 247 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 MBTD1Q05BQ5 628 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 ZNF235Q14590 738 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 CEP85LQ5SZL2 805 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 SEZ6LQ9BYH1 1024 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 PDZD7Q9H5P4 517 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 ATP8A1Q9Y2Q0 1164 aa20.33■□□□□ 0.84
CXXC4-201ENST00000394767 CNMDO75829 334 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 GZMAP12544 262 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 ROR1Q01973 937 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 EIF2AQ9BY44 585 aaKnown RBP20.32■□□□□ 0.84
CXXC4-201ENST00000394767 SNX24Q9Y343 169 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 UBR3Q6ZT12 1888 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 RPL9P32969 192 aaKnown RBP20.32■□□□□ 0.84
CXXC4-201ENST00000394767 EFEMP1Q12805 493 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 PPIGQ13427 754 aaKnown RBP eCLIP20.32■□□□□ 0.84
CXXC4-201ENST00000394767 TAPT1Q6NXT6 567 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 SPATA20Q8TB22 786 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 IFT43Q96FT9 208 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 SMARCD1Q96GM5 515 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 GJA9P57773 515 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 ZBTB16Q05516 673 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 ZACNQ401N2 412 aa20.32■□□□□ 0.84
CXXC4-201ENST00000394767 CFAP157Q5JU67 520 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms