RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 AMPD2Q01433 879 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 KCNA1Q09470 495 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 PON2Q15165 354 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 Q6ZS52 159 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 MON1AQ86VX9 555 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 PDCL2Q8N4E4 241 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 C1orf127Q8N9H9 656 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 GIPC2Q8TF65 315 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 IKZF4Q9H2S9 585 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 TMEM206Q9H813 350 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 TDP1Q9NUW8 608 aa18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 CHURC1-FNTBB4DL54 471 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 TRDMT1O14717 391 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 EXTL3O43909 919 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 HUS1O60921 280 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 GCNT3O95395 438 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 ITGB3P05106 788 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 FNTBP49356 437 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 RPL10AP62906 217 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 TFAMQ00059 246 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 TNK2Q07912 1038 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 RUNX3Q13761 415 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 CSRP2Q16527 193 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 CFAP221Q4G0U5 840 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 TMEM196Q5HYL7 178 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 DPH6Q7L8W6 267 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 WDR5BQ86VZ2 330 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 GPIHBP1Q8IV16 184 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 TOP6BLQ8N6T0 577 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 NETO1Q8TDF5 533 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 MRPS31Q92665 395 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 USP13Q92995 863 aaPredicted RBP18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 FUBP3Q96I24 572 aaKnown RBP eCLIP18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 PKMYT1Q99640 499 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 GKN1Q9NS71 199 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 TMLHEQ9NVH6 421 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 RBAKQ9NYW8 714 aaPredicted RBP18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 L1RE1Q9UN81 338 aa18.81■□□□□ 0.6
SNRPA1-202ENST00000394082 GABRDO14764 452 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 ATG13O75143 517 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 PRPF40AO75400 957 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 NOL4O94818 638 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 POLR2BP30876 1174 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 LHX1P48742 406 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 MYL7Q01449 175 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 SPEM2Q0P670 501 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 BFSP1Q12934 665 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 RESTQ13127 1097 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 INTS6LQ5JSJ4 861 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 PRR23BQ6ZRT6 265 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 MAB21L3Q8N8X9 362 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 CEP295NLQ96MC4 621 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 HPS4Q9NQG7 708 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 DDX43Q9NXZ2 648 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 AGAP1Q9UPQ3 857 aa18.8■□□□□ 0.6
SNRPA1-202ENST00000394082 SYT1P21579 422 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 PCSK1P29120 753 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 CASP5P51878 434 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 WNT7BP56706 349 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 RBP5P82980 135 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 DMWDQ09019 674 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 GRSF1Q12849 480 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 SLC39A14Q15043 492 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 PDGFRLQ15198 375 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 LIMS2Q7Z4I7 341 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 SYCP3Q8IZU3 236 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 CSGALNACT2Q8N6G5 542 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 TTC8Q8TAM2 541 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 EXOC4Q96A65 974 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 INTS4Q96HW7 963 aaKnown RBP18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 LOXL4Q96JB6 756 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 CLIC6Q96NY7 704 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 PI4K2AQ9BTU6 479 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 SEMA4GQ9NTN9 838 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 CCL26Q9Y258 94 aa18.79■□□□□ 0.6
SNRPA1-202ENST00000394082 OBSL1O75147 1896 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 SLC30A4O14863 429 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 STAT6P42226 847 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 FAM160A1Q05DH4 1040 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 SURF1Q15526 300 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 LPAL2Q16609 132 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 FBXO43Q4G163 708 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 TXNDC8Q6A555 127 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 CC2D1AQ6P1N0 951 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 STXBP4Q6ZWJ1 553 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 CHFRQ96EP1 664 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 SAAL1Q96ER3 474 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 CBWD1Q9BRT8 395 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 SMG9Q9H0W8 520 aaKnown RBP18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 ZSCAN16Q9H4T2 348 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 PANK4Q9NVE7 773 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 C2orf42Q9NWW7 574 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 TBC1D7Q9P0N9 293 aa18.78■□□□□ 0.6
SNRPA1-202ENST00000394082 AKAP3O75969 853 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 IDEP14735 1019 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 TCF3P15923 654 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 PFKLP17858 780 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 DRD1P21728 446 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 MAGEA11P43364 429 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms