RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LIMS2Q7Z4I7 341 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 TMC8Q8IU68 726 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 ELOA2Q8IYF1 753 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 DCP1BQ8IZD4 617 aaKnown RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 ELMOD1Q8N336 334 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 OR6B3Q8NGW1 331 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 TMC2Q8TDI7 906 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 NELFBQ8WX92 580 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 EDAQ92838 391 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 FGF14Q92915 247 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 SYAP1Q96A49 352 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZNF512Q96ME7 567 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZSWIM3Q96MP5 696 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 DUSP9Q99956 384 aaKnown RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 KXD1Q9BQD3 176 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 SYT15Q9BQS2 421 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 ACBD6Q9BR61 282 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 LRFN3Q9BTN0 628 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 SNX25Q9H3E2 840 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 APOBEC3GQ9HC16 384 aaKnown RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 EPS15L1Q9UBC2 864 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 HMGXB4Q9UGU5 601 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 CDH7Q9ULB5 785 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 SORCS3Q9UPU3 1222 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 PCDHB5Q9Y5E4 795 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 A0A1W2PRU2 124 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 PSMA7O14818 248 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 MAPK13O15264 365 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 HAPLN1P10915 354 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CCNE1P24864 410 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 GNL1P36915 607 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 ASPAP45381 313 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 LHX1P48742 406 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 AP3M2P53677 418 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CACNA2D1P54289 1103 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 EPHB3P54753 998 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CYP4F8P98187 520 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CYP27A1Q02318 531 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 STIM1Q13586 685 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 DDR2Q16832 855 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CBWD6Q4V339 395 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZNF667Q5HYK9 610 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CBWD3Q5JTY5 395 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CBWD5Q5RIA9 395 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CYP4A22Q5TCH4 519 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 TCERG1LQ5VWI1 586 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 TTI2Q6NXR4 508 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 HFE2Q6ZVN8 426 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 RTL10Q7L3V2 364 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 DNAJB7Q7Z6W7 309 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 SPATA2LQ8IUW3 424 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 SCN4BQ8IWT1 228 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZC3H3Q8IXZ2 948 aaKnown RBP8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 SHKBP1Q8TBC3 707 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 SPPL2BQ8TCT7 592 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 GPT2Q8TD30 523 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 SEMA4DQ92854 862 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 C1QTNF1Q9BXJ1 281 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 LRRC3Q9BY71 257 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 PLA2G2FQ9BZM2 168 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 CLSTN2Q9H4D0 955 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 ASAH2Q9NR71 780 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 KIAA1468Q9P260 1216 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 MAGED2Q9UNF1 606 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 NCANO14594 1321 aa8.2□□□□□ -1.1
HMGB3P1-201ENST00000393368 COL4A3Q01955 1670 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 TMEM221A6NGB7 291 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 A8MXQ7 604 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 ANHXE9PGG2 379 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 M0R296 226 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 CLDN5O00501 218 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 IKBKBO14920 756 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC16A3O15427 465 aaKnown RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 GPR37L1O60883 481 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 TACC1O75410 805 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 STAU1O95793 577 aaKnown RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 ASS1P00966 412 aaKnown RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 CFHP08603 1231 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 CD58P19256 250 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 BDNFP23560 247 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 FCARP24071 287 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 GABRR2P28476 465 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 PCSK1P29120 753 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 ATICP31939 592 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 TUFMP49411 452 aaKnown RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 MXI1P50539 228 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 NOP14P78316 857 aaKnown RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 FKBP3Q00688 224 aaKnown RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 LRRC63Q05C16 580 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 PAK1Q13153 545 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 TDGQ13569 410 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 NFE2Q16621 373 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 SGSM1Q2NKQ1 1148 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 FAM78AQ5JUQ0 283 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 IER5LQ5T953 404 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 FAM171BQ6P995 826 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 CLEC17AQ6ZS10 378 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms