RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ACAP1Q15027 740 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 ATP13A4Q4VNC1 1196 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 TNFAIP8L3Q5GJ75 292 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 CYP4A22Q5TCH4 519 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 MFSD7Q6UXD7 560 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 ZNF365Q70YC5 407 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 CCDC114Q96M63 670 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 ADAMTS10Q9H324 1103 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 GBA2Q9HCG7 927 aaPredicted RBP15.09■□□□□ 0.01
MKS1-203ENST00000393120 SLC5A4Q9NY91 659 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 RSPH14Q9UHP6 348 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 ANAPC5Q9UJX4 755 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.09■□□□□ 0.01
MKS1-203ENST00000393120 AGTP01019 485 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 RFC1P35251 1148 aaPredicted RBP15.09■□□□□ 0.01
MKS1-203ENST00000393120 CDR1P51861 262 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 ITGA8P53708 1063 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 PSMC1P62191 440 aaKnown RBP15.09■□□□□ 0.01
MKS1-203ENST00000393120 TFDP3Q5H9I0 405 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 MFSD5Q6N075 450 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 CEP128Q6ZU80 1094 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 CENPTQ96BT3 561 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 TWNKQ96RR1 684 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 STMN4Q9H169 189 aaPredicted RBP15.09■□□□□ 0.01
MKS1-203ENST00000393120 LRRC4CQ9HCJ2 640 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 DPP3Q9NY33 737 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 BARX2Q9UMQ3 279 aaPredicted RBP15.09■□□□□ 0.01
MKS1-203ENST00000393120 AGAP1Q9UPQ3 857 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 hCG_1818297A0A087WSY0 165 aa15.08■□□□□ 0
MKS1-203ENST00000393120 A6NJR5 290 aa15.08■□□□□ 0
MKS1-203ENST00000393120 EBAG9O00559 213 aa15.08■□□□□ 0
MKS1-203ENST00000393120 KRT7P08729 469 aa15.08■□□□□ 0
MKS1-203ENST00000393120 FGFR4P22455 802 aa15.08■□□□□ 0
MKS1-203ENST00000393120 GJC1P36383 396 aa15.08■□□□□ 0
MKS1-203ENST00000393120 CDKN2BP42772 138 aa15.08■□□□□ 0
MKS1-203ENST00000393120 GPD2P43304 727 aa15.08■□□□□ 0
MKS1-203ENST00000393120 XYLT1Q86Y38 959 aa15.08■□□□□ 0
MKS1-203ENST00000393120 RAPGEF5Q92565 580 aa15.08■□□□□ 0
MKS1-203ENST00000393120 NKD2Q969F2 451 aaPredicted RBP15.08■□□□□ 0
MKS1-203ENST00000393120 MCRS1Q96EZ8 462 aa15.08■□□□□ 0
MKS1-203ENST00000393120 CPXM1Q96SM3 734 aa15.08■□□□□ 0
MKS1-203ENST00000393120 PPP1R16BQ96T49 567 aa15.08■□□□□ 0
MKS1-203ENST00000393120 PTPN18Q99952 460 aa15.08■□□□□ 0
MKS1-203ENST00000393120 FRMD8P1Q9BZ68 369 aaPredicted RBP15.08■□□□□ 0
MKS1-203ENST00000393120 EVPLQ92817 2033 aa15.08■□□□□ 0
MKS1-203ENST00000393120 C3orf70A6NLC5 250 aaPredicted RBP15.07■□□□□ 0
MKS1-203ENST00000393120 DCDC2CA8MYV0 355 aa15.07■□□□□ 0
MKS1-203ENST00000393120 PI4K2BG5E9Z4 385 aa15.07■□□□□ 0
MKS1-203ENST00000393120 RGS16O15492 202 aaPredicted RBP15.07■□□□□ 0
MKS1-203ENST00000393120 MICAL2O94851 1124 aa15.07■□□□□ 0
MKS1-203ENST00000393120 TTC4O95801 387 aa15.07■□□□□ 0
MKS1-203ENST00000393120 KRT10P13645 584 aa15.07■□□□□ 0
MKS1-203ENST00000393120 PSMA2P25787 234 aa15.07■□□□□ 0
MKS1-203ENST00000393120 SLC25A11Q02978 314 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 TAZQ16635 292 aa15.07■□□□□ 0
MKS1-203ENST00000393120 HADHQ16836 314 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 SRLQ86TD4 932 aa15.07■□□□□ 0
MKS1-203ENST00000393120 C2orf69Q8N8R5 385 aa15.07■□□□□ 0
MKS1-203ENST00000393120 NPLOC4Q8TAT6 608 aa15.07■□□□□ 0
MKS1-203ENST00000393120 CDC42EP4Q9H3Q1 356 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 NDUFAB1O14561 156 aa15.07■□□□□ 0
MKS1-203ENST00000393120 RASGRF2O14827 1237 aa15.07■□□□□ 0
MKS1-203ENST00000393120 TCEA3O75764 348 aa15.07■□□□□ 0
MKS1-203ENST00000393120 FAM107AO95990 144 aa15.07■□□□□ 0
MKS1-203ENST00000393120 ERBB2P04626 1255 aa15.07■□□□□ 0
MKS1-203ENST00000393120 HOXA11P31270 313 aaPredicted RBP15.07■□□□□ 0
MKS1-203ENST00000393120 CCT5P48643 541 aa15.07■□□□□ 0
MKS1-203ENST00000393120 MKRN3Q13064 507 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 STILQ15468 1287 aa15.07■□□□□ 0
MKS1-203ENST00000393120 HIBCHQ6NVY1 386 aaPredicted RBP15.07■□□□□ 0
MKS1-203ENST00000393120 LCLAT1Q6UWP7 414 aa15.07■□□□□ 0
MKS1-203ENST00000393120 B4GALNT4Q76KP1 1039 aa15.07■□□□□ 0
MKS1-203ENST00000393120 SPATS2Q86XZ4 545 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 ARFGAP1Q8N6T3 406 aa15.07■□□□□ 0
MKS1-203ENST00000393120 IPO4Q8TEX9 1081 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 HEXIM2Q96MH2 286 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 GCOM2Q9BZD3 368 aaPredicted RBP15.07■□□□□ 0
MKS1-203ENST00000393120 MIS12Q9H081 205 aa15.07■□□□□ 0
MKS1-203ENST00000393120 HMGXB4Q9UGU5 601 aa15.07■□□□□ 0
MKS1-203ENST00000393120 RRP15Q9Y3B9 282 aaKnown RBP15.07■□□□□ 0
MKS1-203ENST00000393120 NRCAMQ92823 1304 aa15.07■□□□□ 0
MKS1-203ENST00000393120 SMIM35A0A1B0GVV1 85 aa15.06■□□□□ 0
MKS1-203ENST00000393120 MBLAC1A4D2B0 266 aaPredicted RBP15.06■□□□□ 0
MKS1-203ENST00000393120 GOLGA8SH3BPF8 625 aa15.06■□□□□ 0
MKS1-203ENST00000393120 NDC80O14777 642 aa15.06■□□□□ 0
MKS1-203ENST00000393120 TRAPPC3O43617 180 aa15.06■□□□□ 0
MKS1-203ENST00000393120 GPR32O75388 356 aa15.06■□□□□ 0
MKS1-203ENST00000393120 LRCH4O75427 683 aa15.06■□□□□ 0
MKS1-203ENST00000393120 ITGAVP06756 1048 aa15.06■□□□□ 0
MKS1-203ENST00000393120 ATF7P17544 494 aaPredicted RBP15.06■□□□□ 0
MKS1-203ENST00000393120 CHKAP35790 457 aa15.06■□□□□ 0
MKS1-203ENST00000393120 MMP13P45452 471 aa15.06■□□□□ 0
MKS1-203ENST00000393120 MYO1EQ12965 1108 aa15.06■□□□□ 0
MKS1-203ENST00000393120 TRIP13Q15645 432 aaPredicted RBP15.06■□□□□ 0
MKS1-203ENST00000393120 GPR162Q16538 588 aa15.06■□□□□ 0
MKS1-203ENST00000393120 TXNRD3NBQ6F5E7 133 aa15.06■□□□□ 0
MKS1-203ENST00000393120 CCDC25Q86WR0 208 aa15.06■□□□□ 0
MKS1-203ENST00000393120 ALLCQ8N6M5 410 aa15.06■□□□□ 0
MKS1-203ENST00000393120 JOSD2Q8TAC2 188 aa15.06■□□□□ 0
MKS1-203ENST00000393120 KIF12Q96FN5 646 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms