RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 TRIM6Q9C030 488 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 ZDHHC18Q9NUE0 388 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 FEZ2Q9UHY8 353 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 O00370 1275 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 MICAL2O94851 1124 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 GJB6O95452 261 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 ECEL1O95672 775 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 GABRB2P47870 512 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 PRKCZQ05513 592 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 TMC3Q7Z5M5 1100 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 RCOR2Q8IZ40 523 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 ZMAT2Q96NC0 199 aaKnown RBP21.21■□□□□ 0.99
PTPN11-202ENST00000392597 NT5C1AQ9BXI3 368 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 TRIM31Q9BZY9 425 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 FAM204AQ9H8W3 233 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 SRRDQ9UH36 339 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 CYTH4Q9UIA0 394 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 USTQ9Y2C2 406 aa21.21■□□□□ 0.99
PTPN11-202ENST00000392597 HSD17B3P37058 310 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 FLT3LGP49771 235 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 NDST1P52848 882 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 GYS2P54840 703 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 COPS2P61201 443 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 CYP4A22Q5TCH4 519 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 TAF2Q6P1X5 1199 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 CCDC50Q8IVM0 306 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 C7orf31Q8N865 590 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 HEXIM2Q96MH2 286 aaKnown RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 OSBPL8Q9BZF1 889 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 UBQLN1Q9UMX0 589 aaKnown RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 PPFIA2O75334 1257 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 RECQL4O94761 1208 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 HSPA8P11142 646 aaKnown RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 SSR1P43307 286 aaKnown RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 DAB2IPQ5VWQ8 1189 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 LCLAT1Q6UWP7 414 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 GRK7Q8WTQ7 553 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 TMEM40Q8WWA1 233 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 CPXM1Q96SM3 734 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 DCLK3Q9C098 648 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 MIS12Q9H081 205 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 NXF3Q9H4D5 531 aaKnown RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 DDX56Q9NY93 547 aaKnown RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 GRHL1Q9NZI5 618 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 GABRQQ9UN88 632 aa21.2■□□□□ 0.98
PTPN11-202ENST00000392597 PIN4Q9Y237 131 aaKnown RBP21.2■□□□□ 0.98
PTPN11-202ENST00000392597 SCN1AP35498 2009 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 CD4P01730 458 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 RALAP11233 206 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 KRT3P12035 628 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 ATF7P17544 494 aaPredicted RBP21.19■□□□□ 0.98
PTPN11-202ENST00000392597 PTPN7P35236 360 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 GPD2P43304 727 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 GJA9P57773 515 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 PSMC1P62191 440 aaKnown RBP21.19■□□□□ 0.98
PTPN11-202ENST00000392597 ZNF200P98182 395 aaPredicted RBP21.19■□□□□ 0.98
PTPN11-202ENST00000392597 OGDHQ02218 1023 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 XKR4Q5GH76 650 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 POLNQ7Z5Q5 900 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 XYLT1Q86Y38 959 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 PPP1R13LQ8WUF5 828 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 ZBTB9Q96C00 473 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 TXLNGYQ9BZA5 131 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 SYNCQ9H7C4 482 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 SNX24Q9Y343 169 aa21.19■□□□□ 0.98
PTPN11-202ENST00000392597 GOLGA6CA6NDK9 693 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 M0QYV0 167 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 XPOTO43592 962 aaKnown RBP21.18■□□□□ 0.98
PTPN11-202ENST00000392597 GOLGA6DP0CG33 693 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 CYBAP13498 195 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 RPL21P46778 160 aaKnown RBP21.18■□□□□ 0.98
PTPN11-202ENST00000392597 CTCFP49711 727 aaPredicted RBP21.18■□□□□ 0.98
PTPN11-202ENST00000392597 PRMT2P55345 433 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 NFX1Q12986 1120 aaKnown RBP21.18■□□□□ 0.98
PTPN11-202ENST00000392597 PDCLQ13371 301 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 ORC1Q13415 861 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 ZDHHC24Q6UX98 284 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 TRPV1Q8NER1 839 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 MCRS1Q96EZ8 462 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 HERPUD2Q9BSE4 406 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 GOLGA6AQ9NYA3 693 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 PLAAQ9Y263 795 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 F8VP50 259 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 KCNE1P15382 129 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 DHX9Q08211 1270 aaKnown RBP21.18■□□□□ 0.98
PTPN11-202ENST00000392597 UAP1Q16222 522 aaPredicted RBP21.18■□□□□ 0.98
PTPN11-202ENST00000392597 CCNG2Q16589 344 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 MFSD14CQ5VZR4 134 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 FAM76AQ8TAV0 307 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 C1orf54Q8WWF1 131 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 MTG1Q9BT17 334 aaPredicted RBP21.18■□□□□ 0.98
PTPN11-202ENST00000392597 TUBGCP4Q9UGJ1 667 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 HES2Q9Y543 173 aa21.18■□□□□ 0.98
PTPN11-202ENST00000392597 SCN10AQ9Y5Y9 1956 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 ERBB2P04626 1255 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 RFC1P35251 1148 aaPredicted RBP21.17■□□□□ 0.98
PTPN11-202ENST00000392597 FLT3P36888 993 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 NKX3-2P78367 333 aa21.17■□□□□ 0.98
PTPN11-202ENST00000392597 ACAP1Q15027 740 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms