RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 TBC1D4O60343 1298 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 RHOBTB3O94955 611 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 HMGB1P09429 215 aaKnown RBP6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 ATXN1LP0C7T5 689 aaKnown RBP6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PPP3CBP16298 524 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PROZP22891 400 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 ZNF134P52741 427 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SUMO3P55854 103 aaPredicted RBP6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SEMA5AQ13591 1074 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 POLD3Q15054 466 aaPredicted RBP6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 HSP90AB2PQ58FF8 381 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PPP4R4Q6NUP7 873 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 FAM109AQ8N4B1 249 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MAML1Q92585 1016 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MOGAT1Q96PD6 335 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 DDX21Q9NR30 783 aaKnown RBP eCLIP6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 CPNE7Q9UBL6 633 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 DMRT1Q9Y5R6 373 aa6.31□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MYO1CO00159 1063 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 YY2O15391 372 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PEX1O43933 1283 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 CYP2C9P11712 490 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PEX2P28328 305 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 FOLR3P41439 243 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 FMO1Q01740 532 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SLC13A2Q13183 592 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 CNGA2Q16280 664 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 RBM20Q5T481 1227 aaKnown RBP6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 KIAA0895LQ68EN5 471 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 TMEM108Q6UXF1 575 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SLC15A4Q8N697 577 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PGBD1Q96JS3 809 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 LRRC27Q9C0I9 530 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 STK32BQ9NY57 414 aa6.3□□□□□ -1.4
RNU6-1000P-201ENST00000391066 WDR33Q9C0J8 1336 aaKnown RBP6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MGEA5O60502 916 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 BRAFP15056 766 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 CD6P30203 668 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 WNT3P56703 355 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 LOXL3P58215 753 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 HLTFQ14527 1009 aaKnown RBP eCLIP6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PTPRRQ15256 657 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 VPS53Q5VIR6 699 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 LAYNQ6UX15 382 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 B3GALNT2Q8NCR0 500 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MYCBPAPQ8TBZ2 947 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SLC9A6Q92581 669 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 NMD3Q96D46 503 aaKnown RBP6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 NELL2Q99435 816 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MESP1Q9BRJ9 268 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PTDSS2Q9BVG9 487 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 ZNF518BQ9C0D4 1074 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 KIAA1586Q9HCI6 787 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PCDHGB6Q9Y5F9 930 aa6.29□□□□□ -1.4
RNU6-1000P-201ENST00000391066 TRIM43BA6NCK2 446 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MPPED1O15442 326 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PXNP49023 591 aaPredicted RBP6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 HMGA2P52926 109 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 NXPH1P58417 271 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 LILRA4P59901 499 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 ITIH3Q06033 890 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 RAB32Q13637 225 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SFRP4Q6FHJ7 346 aaPredicted RBP6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 MICU3Q86XE3 530 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 TOR1AIP2Q8NFQ8 470 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 GPR150Q8NGU9 434 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 TRIM43Q96BQ3 446 aaPredicted RBP6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 FAM136AQ96C01 138 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 AGAP2Q99490 1192 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SARGQ9BW04 601 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 TPSD1Q9BZJ3 242 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SACM1LQ9NTJ5 587 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 SHOC2Q9UQ13 582 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 PAXBP1Q9Y5B6 917 aa6.28□□□□□ -1.4
RNU6-1000P-201ENST00000391066 TMEM233B4DJY2 109 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 MAP4K4O95819 1239 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 TYRP1P17643 537 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 GNALP38405 381 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 MRPS35P82673 323 aaKnown RBP6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 COL10A1Q03692 680 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 ZNF169Q14929 603 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 SLC44A4Q53GD3 710 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 ICE2Q659A1 982 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 SESTD1Q86VW0 696 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 GAS2L3Q86XJ1 694 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 KRT78Q8N1N4 520 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 FBXL20Q96IG2 436 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 CCDC136Q96JN2 1154 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 ACTRT3Q9BYD9 372 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 MS4A7Q9GZW8 240 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 NUP62CLQ9H1M0 184 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 ZNF287Q9HBT7 754 aa6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 ALG13Q9NP73 1137 aaKnown RBP6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 A1CFQ9NQ94 594 aaKnown RBP6.27□□□□□ -1.41
RNU6-1000P-201ENST00000391066 FOXJ2Q9P0K8 574 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms