RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 KRT3P12035 628 aa26.63■■□□□ 1.85
SHOX2-201ENST00000389589 DRG2P55039 364 aaKnown RBP26.63■■□□□ 1.85
SHOX2-201ENST00000389589 DUPD1Q68J44 220 aa26.63■■□□□ 1.85
SHOX2-201ENST00000389589 TWF2Q6IBS0 349 aaKnown RBP26.63■■□□□ 1.85
SHOX2-201ENST00000389589 UNC93AQ86WB7 457 aa26.63■■□□□ 1.85
SHOX2-201ENST00000389589 FNIP1Q8TF40 1166 aa26.63■■□□□ 1.85
SHOX2-201ENST00000389589 CPXM1Q96SM3 734 aa26.63■■□□□ 1.85
SHOX2-201ENST00000389589 TRIM51Q9BSJ1 452 aa26.63■■□□□ 1.85
SHOX2-201ENST00000389589 SP3Q02447 781 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 ZNF252P-AS1Q0IIN9 211 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 RPAINQ86UA6 219 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 SERINC5Q86VE9 423 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 SESTD1Q86VW0 696 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 DDX42Q86XP3 938 aaKnown RBP eCLIP26.62■■□□□ 1.85
SHOX2-201ENST00000389589 SMG8Q8ND04 991 aaKnown RBP26.62■■□□□ 1.85
SHOX2-201ENST00000389589 POLR3GO15318 223 aaPredicted RBP26.62■■□□□ 1.85
SHOX2-201ENST00000389589 HSF2BPO75031 334 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 GBP1P32455 592 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 TRIM32Q13049 653 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 PDCLQ13371 301 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 FBXO47Q5MNV8 452 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 DAB2IPQ5VWQ8 1189 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 XYLT1Q86Y38 959 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 CCDC50Q8IVM0 306 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 RNF39Q9H2S5 420 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 HOMER3Q9NSC5 361 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 KLK14Q9P0G3 267 aa26.62■■□□□ 1.85
SHOX2-201ENST00000389589 GOLGA8SH3BPF8 625 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 FAM47CQ5HY64 1035 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 TTC27Q6P3X3 843 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 RCOR2Q8IZ40 523 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 TSEN2Q8NCE0 465 aaKnown RBP26.61■■□□□ 1.85
SHOX2-201ENST00000389589 IPO4Q8TEX9 1081 aaKnown RBP26.61■■□□□ 1.85
SHOX2-201ENST00000389589 RBM41Q96IZ5 413 aaKnown RBP26.61■■□□□ 1.85
SHOX2-201ENST00000389589 MRPL45Q9BRJ2 306 aaKnown RBP26.61■■□□□ 1.85
SHOX2-201ENST00000389589 DNAI2Q9GZS0 605 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 RPS6KA5O75582 802 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 ERBB2P04626 1255 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 HSPA9P38646 679 aaKnown RBP26.61■■□□□ 1.85
SHOX2-201ENST00000389589 OGDHQ02218 1023 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 CCDC105Q8IYK2 499 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 SLCO2A1Q92959 643 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 LRRC45Q96CN5 670 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 DPH5Q9H2P9 285 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 CHST12Q9NRB3 414 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 TSPAN16Q9UKR8 245 aa26.61■■□□□ 1.85
SHOX2-201ENST00000389589 CST5P28325 142 aaPredicted RBP26.6■■□□□ 1.85
SHOX2-201ENST00000389589 GGCXP38435 758 aa26.6■■□□□ 1.85
SHOX2-201ENST00000389589 FAM193AP78312 1265 aa26.6■■□□□ 1.85
SHOX2-201ENST00000389589 KLHDC9Q8NEP7 349 aa26.6■■□□□ 1.85
SHOX2-201ENST00000389589 MCRS1Q96EZ8 462 aa26.6■■□□□ 1.85
SHOX2-201ENST00000389589 GDAP2Q9NXN4 497 aa26.6■■□□□ 1.85
SHOX2-201ENST00000389589 DDX56Q9NY93 547 aaKnown RBP26.6■■□□□ 1.85
SHOX2-201ENST00000389589 F8VP50 259 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 SYF2O95926 243 aaKnown RBP26.59■■□□□ 1.85
SHOX2-201ENST00000389589 RFC1P35251 1148 aaPredicted RBP26.59■■□□□ 1.85
SHOX2-201ENST00000389589 DPH6Q7L8W6 267 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 OSBPL8Q9BZF1 889 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 SENP6Q9GZR1 1112 aaPredicted RBP26.59■■□□□ 1.85
SHOX2-201ENST00000389589 KPNA7A9QM74 516 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 AGPSO00116 658 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 AOC2O75106 756 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 ASGR1P07306 291 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 PRKAR2AP13861 404 aaKnown RBP26.59■■□□□ 1.85
SHOX2-201ENST00000389589 PSMA2P25787 234 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 TAF6P49848 677 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 SV2CQ496J9 727 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 HACE1Q8IYU2 909 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 UBA3Q8TBC4 463 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 RUFY1Q96T51 708 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 TJP2Q9UDY2 1190 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 ST3GAL5Q9UNP4 418 aa26.59■■□□□ 1.85
SHOX2-201ENST00000389589 SETSIPP0DME0 302 aa26.58■■□□□ 1.85
SHOX2-201ENST00000389589 RALAP11233 206 aa26.58■■□□□ 1.85
SHOX2-201ENST00000389589 CCND3P30281 292 aaPredicted RBP26.58■■□□□ 1.85
SHOX2-201ENST00000389589 COPS2P61201 443 aa26.58■■□□□ 1.85
SHOX2-201ENST00000389589 KLF1Q13351 362 aaPredicted RBP26.58■■□□□ 1.85
SHOX2-201ENST00000389589 KCNA10Q16322 511 aa26.58■■□□□ 1.85
SHOX2-201ENST00000389589 SOWAHAQ2M3V2 549 aa26.58■■□□□ 1.85
SHOX2-201ENST00000389589 FEZ2Q9UHY8 353 aaPredicted RBP26.58■■□□□ 1.85
SHOX2-201ENST00000389589 OPA1O60313 960 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 GJC1P36383 396 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 ACAP1Q15027 740 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 GOLGA7BQ2TAP0 167 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 CFAP58Q5T655 872 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 POLNQ7Z5Q5 900 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 PCSK9Q8NBP7 692 aaKnown RBP26.58■■□□□ 1.84
SHOX2-201ENST00000389589 OR6B3Q8NGW1 331 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 TRIM31Q9BZY9 425 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 NEUROG2Q9H2A3 272 aa26.58■■□□□ 1.84
SHOX2-201ENST00000389589 ECEL1O95672 775 aa26.57■■□□□ 1.84
SHOX2-201ENST00000389589 NFX1Q12986 1120 aaKnown RBP26.57■■□□□ 1.84
SHOX2-201ENST00000389589 DEFB115Q30KQ5 88 aa26.57■■□□□ 1.84
SHOX2-201ENST00000389589 SYDE1Q6ZW31 735 aaPredicted RBP26.57■■□□□ 1.84
SHOX2-201ENST00000389589 ACOT1Q86TX2 421 aa26.57■■□□□ 1.84
SHOX2-201ENST00000389589 ARRDC4Q8NCT1 418 aa26.57■■□□□ 1.84
SHOX2-201ENST00000389589 JOSD2Q8TAC2 188 aa26.57■■□□□ 1.84
SHOX2-201ENST00000389589 GRK7Q8WTQ7 553 aa26.57■■□□□ 1.84
SHOX2-201ENST00000389589 CAPNS2Q96L46 248 aa26.57■■□□□ 1.84
SHOX2-201ENST00000389589 METTL5Q9NRN9 209 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms