RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ATP8A1Q9Y2Q0 1164 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 LOC102724159A0A0B4J2E5 919 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 SMIM35A0A1B0GVV1 85 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 GOLGA6BA6NDN3 693 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 RNF40O75150 1001 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PROSCO94903 275 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 POMCP01189 267 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 CYBAP13498 195 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 CD52P31358 61 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 GRM5P41594 1212 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 RPL21P46778 160 aaKnown RBP10.74□□□□□ -0.69
LTN1-203ENST00000389195 PWP2Q15269 919 aaKnown RBP10.74□□□□□ -0.69
LTN1-203ENST00000389195 PLEKHA7Q6IQ23 1121 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 TTC30AQ86WT1 665 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 JAMLQ86YT9 394 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PIK3R5Q8WYR1 880 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 SNX27Q96L92 541 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 CCDC114Q96M63 670 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 RHOBTB2Q9BYZ6 727 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 GPATCH2LQ9NWQ4 482 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 INPP5FQ9Y2H2 1132 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 BPTFQ12830 3046 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 TTC3P53804 2025 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 SYNJ2BP-COX16A0A087WUM0 186 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 TMEM191CA6NGB0 347 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 MGEA5O60502 916 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PIAS1O75925 651 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 COL1A2P08123 1366 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PFKMP08237 780 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 KRT3P12035 628 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 RBP5P82980 135 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 ITIH3Q06033 890 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 MMRN1Q13201 1228 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 SGO2Q562F6 1265 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 LIN9Q5TKA1 542 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 ZNF410Q86VK4 478 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PHF13Q86YI8 300 aaPredicted RBP10.74□□□□□ -0.69
LTN1-203ENST00000389195 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
LTN1-203ENST00000389195 FMNL3Q8IVF7 1028 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 UBLCP1Q8WVY7 318 aaPredicted RBP10.74□□□□□ -0.69
LTN1-203ENST00000389195 HSPH1Q92598 858 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 KCNN1Q92952 543 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 CFAP57Q96MR6 1250 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 RPS6KC1Q96S38 1066 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 UBXN6Q9BZV1 441 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 WNT8AQ9H1J5 351 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PARVAQ9NVD7 372 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 COX16Q9P0S2 106 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 RNF14Q9UBS8 474 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PPME1Q9Y570 386 aa10.74□□□□□ -0.69
LTN1-203ENST00000389195 PTGESO14684 152 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 BEST1O76090 585 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 GPD2P43304 727 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 FCGRTP55899 365 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 UAP1Q16222 522 aaPredicted RBP10.73□□□□□ -0.69
LTN1-203ENST00000389195 GOLGA7BQ2TAP0 167 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 FAM102AQ5T9C2 384 aaPredicted RBP10.73□□□□□ -0.69
LTN1-203ENST00000389195 C9orf57Q5W0N0 161 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 OR6B2Q6IFH4 312 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 ZNF677Q86XU0 584 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 C3orf58Q8NDZ4 430 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 STKLD1Q8NE28 680 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 CAPNS2Q96L46 248 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 TRPV6Q9H1D0 765 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 ASB7Q9H672 318 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 FAM204AQ9H8W3 233 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 TMPRSS4Q9NRS4 437 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 ADAM21Q9UKJ8 722 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 TTC7AQ9ULT0 858 aaPredicted RBP10.73□□□□□ -0.69
LTN1-203ENST00000389195 NR2E3Q9Y5X4 410 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 LRRD1A4D1F6 860 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 A8MXQ7 604 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 DUSP11O75319 330 aaKnown RBP10.73□□□□□ -0.69
LTN1-203ENST00000389195 MTA2O94776 668 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 LCP1P13796 627 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 PSMA2P25787 234 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 PTGIRP43119 386 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 TM4SF4P48230 202 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 ATP1A2P50993 1020 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 AP3M2P53677 418 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 HADHBP55084 474 aaKnown RBP10.73□□□□□ -0.69
LTN1-203ENST00000389195 SREBF2Q12772 1141 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 PDCLQ13371 301 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 SURF1Q15526 300 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 TERF2Q15554 542 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 SCYL2Q6P3W7 929 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 XYLT1Q86Y38 959 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 BCCIPQ9P287 314 aaKnown RBP eCLIP10.73□□□□□ -0.69
LTN1-203ENST00000389195 DAAM1Q9Y4D1 1078 aa10.73□□□□□ -0.69
LTN1-203ENST00000389195 TCRBV5S1A1TA0A578 114 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 CCDC66A2RUB6 948 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 DCDC2CA8MYV0 355 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 RPS6KA5O75582 802 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 CLCNKBP51801 687 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 EPHB4P54760 987 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.69
LTN1-203ENST00000389195 MAATS1Q7Z4T9 603 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 GSTCDQ8NEC7 633 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 SOCS4Q8WXH5 440 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms