RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 RITA1Q96K30 269 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CTAGE1Q96RT6 745 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 OSBPL9Q96SU4 736 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 TTC1Q99614 292 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 FAM118BQ9BPY3 351 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 VKORC1Q9BQB6 163 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZPBPQ9BS86 351 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SLCO5A1Q9H2Y9 848 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 IFT22Q9H7X7 185 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 VTA1Q9NP79 307 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SLAMF7Q9NQ25 335 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SERHLQ9NQF3 203 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 DUSP22Q9NRW4 184 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 IGSF5Q9NSI5 407 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 TDP1Q9NUW8 608 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 MRPS18AQ9NVS2 196 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 FANCLQ9NW38 375 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 C14orf119Q9NWQ9 140 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 DLL3Q9NYJ7 618 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ADAMTS5Q9UNA0 930 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SCAF8Q9UPN6 1271 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ICKQ9UPZ9 632 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CCDC9Q9Y3X0 531 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 RAD54BQ9Y620 910 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 LY6G6EA0A0G2JKS1 128 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 FAM90A8PA6NJQ4 464 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 IFITM10A6NMD0 228 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF785A8K8V0 405 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 B4DGG1 531 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 POC1B-GALNT4F8VUJ3 575 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 UBE2Q2LH0YL09 131 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 FZD9O00144 591 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 SLC16A3O15427 465 aaKnown RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 SMAD6O43541 496 aaKnown RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ZEB2O60315 1214 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TLR5O60602 858 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 PDE8AO60658 829 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 KIF20AO95235 890 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 GJB1P08034 283 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 GNAI3P08754 354 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 IL6RP08887 468 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 NPSP0C0P6 89 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 FAM90A13PP0C7W8 464 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 FAM90A24PP0C7X0 464 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TGFB3P10600 412 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 PSG1P11464 419 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 MYCLP1P12525 358 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 BPIP17213 487 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 MT3P25713 68 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 PCSK6P29122 969 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 GPR3P46089 330 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ME1P48163 572 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ALDH5A1P51649 535 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF135P52742 658 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 GNAI1P63096 354 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 GPSM2P81274 684 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 CDC42EP1Q00587 391 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TARDBPQ13148 414 aaKnown RBP eCLIP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 IL10RAQ13651 578 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 GTF2H3Q13889 308 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 HABP2Q14520 560 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF268Q14587 947 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TWIST1Q15672 202 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 CLUL1Q15846 466 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TBC1D25Q3MII6 688 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 LEXMQ3ZCV2 418 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 CERKLQ49MI3 558 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 CCDC93Q567U6 631 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 DGKKQ5KSL6 1271 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 C10orf25Q5T742 122 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 L1TD1Q5T7N2 865 aaKnown RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TEDDM1Q5T9Z0 273 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TMEM108Q6UXF1 575 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 C9orf47Q6ZRZ4 202 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 COLCA1Q6ZS62 124 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 C18orf65Q6ZTR6 163 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 C16orf86Q6ZW13 317 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 MIGA2Q7L4E1 593 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 DTX2Q86UW9 622 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 GALNT4Q8N4A0 578 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 UBR7Q8N806 425 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 TERB1Q8NA31 727 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 PSD4Q8NDX1 1056 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.78□□□□□ -2.286e-32■□□□□ 8.9
SNORD28-201ENST00000384706 ZNF548Q8NEK5 533 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ABHD11Q8NFV4 315 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 PIGOQ8TEQ8 1089 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 SCAMP4Q969E2 229 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 COQ8BQ96D53 544 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 MFSD3Q96ES6 412 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 AHCYL2Q96HN2 611 aaKnown RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 ZC3H10Q96K80 434 aaKnown RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 CLPTM1LQ96KA5 538 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 LMLNQ96KR4 655 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 SIGLEC11Q96RL6 698 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 VRK1Q99986 396 aaPredicted RBP0.78□□□□□ -2.28
SNORD28-201ENST00000384706 EFHD1Q9BUP0 239 aa0.78□□□□□ -2.28
SNORD28-201ENST00000384706 FAM234AQ9H0X4 552 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms