RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ELOA2Q8IYF1 753 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 CTNNAL1Q9UBT7 734 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 COMTP21964 271 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PKN3Q6P5Z2 889 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 TMPRSS6Q8IU80 811 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 DENND3A2RUS2 1198 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 C3orf70A6NLC5 250 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 CENPXA8MT69 81 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 RHOBTB3O94955 611 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 C4orf22Q6V702 233 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 TUBGCP4Q9UGJ1 667 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 RARGP13631 454 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 JAK1P23458 1154 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 ELF3P78545 371 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PKN2Q16513 984 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 TAS2R42Q7RTR8 314 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 CLVS1Q8IUQ0 354 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 MTA3Q9BTC8 594 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 AFF4Q9UHB7 1163 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 ARAP3Q8WWN8 1544 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 SLC16A4O15374 487 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PHGDHO43175 533 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 FMO5P49326 533 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 ANO4Q32M45 955 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 HDHD2Q9H0R4 259 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PCDHA6Q9UN73 950 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PCDHA8Q9Y5H6 950 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 COMMD3-BMI1R4GMX3 469 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 MROH7-TTC4A0A0A0MT08 1334 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PP2D1A8MPX8 630 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 SUPT3HB4E1H0 165 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 HSMCR30P0CW71 290 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 MCEEQ96PE7 176 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 DMAP1Q9NPF5 467 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 PIPSLA2A3N6 862 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 LSM1O15116 133 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 TFE3P19532 575 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 C1DQ13901 141 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 GPD1LQ8N335 351 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 ATXN2LQ8WWM7 1075 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
SRGAP3-202ENST00000383836 CDK8P49336 464 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 AQP5P55064 265 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 MTMR1Q13613 665 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 SLC10A5Q5PT55 438 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 KLHL3Q9UH77 587 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 ZNF197O14709 1029 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 LIN7AO14910 233 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 KLK7P49862 253 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 NCKAP1LP55160 1127 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 KHDRBS2Q5VWX1 349 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 LEMD3Q9Y2U8 911 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 AP3M2P53677 418 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 ITGADQ13349 1161 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 IKBIPQ70UQ0 350 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 CCDC24Q8N4L8 307 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 USP33Q8TEY7 942 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 C18orf8Q96DM3 657 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 DYNLL2Q96FJ2 89 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 KRT84Q9NSB2 600 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 PPLO60437 1756 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 TRIM49D1C9J1S8 452 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 CNOT3O75175 753 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 CCDC130P13994 396 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 MAPK6Q16659 721 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 C11orf88Q6PI97 169 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 ACTRT1Q8TDG2 376 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 TRIM62Q9BVG3 475 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 CYP39A1Q9NYL5 469 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 RRN3Q9NYV6 651 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 PHKG2P15735 406 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 SEL1L3Q68CR1 1132 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 DCAF4Q8WV16 495 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 CCSER1Q9C0I3 900 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 BTG4Q9NY30 223 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 ADGRL3Q9HAR2 1447 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 P4HA2O15460 535 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 TMEM253P0C7T8 217 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 MCAMP43121 646 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 KIZQ2M2Z5 673 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 FAM180AQ6UWF9 173 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 DEFB107AQ8IZN7 70 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 SVOPQ8N4V2 548 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 SHCBP1Q8NEM2 672 aa12.9□□□□□ -0.34
SRGAP3-202ENST00000383836 XRCC4Q13426 336 aa12.9□□□□□ -0.35
SRGAP3-202ENST00000383836 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.35
SRGAP3-202ENST00000383836 TMEM237Q96Q45 408 aa12.9□□□□□ -0.35
SRGAP3-202ENST00000383836 GRIP2Q9C0E4 1043 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms