RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 TRIM7Q9C029 511 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 SYNCQ9H7C4 482 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 TBC1D13Q9NVG8 400 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 TMEM161AQ9NX61 479 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 HCSTQ9UBK5 93 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 DNAJB4Q9UDY4 337 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 TBX21Q9UL17 535 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 SNX12Q9UMY4 172 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.48□□□□□ -1.05
ERCC8-202ENST00000381118 KIF4AO95239 1232 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 MMP8P22894 467 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 ITGB8P26012 769 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 RPL9P32969 192 aaKnown RBP8.48□□□□□ -1.05
ERCC8-202ENST00000381118 FAM189BP81408 668 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 PTP4A2Q12974 167 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
ERCC8-202ENST00000381118 CNGA2Q16280 664 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 PTPN20Q4JDL3 420 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 LIN9Q5TKA1 542 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 C1orf53Q5VUE5 145 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 DAB2IPQ5VWQ8 1189 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 NECAB2Q7Z6G3 386 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 NT5DC3Q86UY8 548 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 UNC93AQ86WB7 457 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 SYCE1Q8N0S2 351 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 COG1Q8WTW3 980 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 TRIM11Q96F44 468 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 CPXM1Q96SM3 734 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 OSBPL9Q96SU4 736 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 DDX43Q9NXZ2 648 aaKnown RBP8.48□□□□□ -1.05
ERCC8-202ENST00000381118 EHD2Q9NZN4 543 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 AMFRQ9UKV5 643 aa8.48□□□□□ -1.05
ERCC8-202ENST00000381118 PRG3Q9Y2Y8 225 aaPredicted RBP8.48□□□□□ -1.05
ERCC8-202ENST00000381118 VWA8A3KMH1 1905 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 GOLGA8SH3BPF8 625 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 TULP2O00295 520 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 KCNK3O14649 394 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 MYBL1P10243 752 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 CDH5P33151 784 aaPredicted RBP8.47□□□□□ -1.05
ERCC8-202ENST00000381118 GPD2P43304 727 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 RGS7P49802 495 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 RNASE9P60153 205 aaKnown RBP8.47□□□□□ -1.05
ERCC8-202ENST00000381118 RPL7AP62424 266 aaKnown RBP8.47□□□□□ -1.05
ERCC8-202ENST00000381118 PDCLQ13371 301 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 MAMLD1Q13495 774 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 RPS6KA1Q15418 735 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
ERCC8-202ENST00000381118 TTC30AQ86WT1 665 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 B3GALNT2Q8NCR0 500 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 SLC2A14Q8TDB8 520 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 ZNF518BQ9C0D4 1074 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 LHX5Q9H2C1 402 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 FAM124BQ9H5Z6 455 aaPredicted RBP8.47□□□□□ -1.05
ERCC8-202ENST00000381118 SMARCAL1Q9NZC9 954 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 UVRAGQ9P2Y5 699 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 ALG6Q9Y672 507 aa8.47□□□□□ -1.05
ERCC8-202ENST00000381118 CDH23Q9H251 3354 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 CLDN5O00501 218 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 CXCL10P02778 98 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 ERBB2P04626 1255 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 CALB1P05937 261 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 COMTP21964 271 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 WARSP23381 471 aaKnown RBP8.46□□□□□ -1.05
ERCC8-202ENST00000381118 PBX3P40426 434 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 BCAR1P56945 870 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 KIAA0319Q5VV43 1072 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 LCLAT1Q6UWP7 414 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 TMCO2Q7Z6W1 182 aaPredicted RBP8.46□□□□□ -1.05
ERCC8-202ENST00000381118 SLFN11Q7Z7L1 901 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 C18orf8Q96DM3 657 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 DDX27Q96GQ7 796 aaKnown RBP8.46□□□□□ -1.05
ERCC8-202ENST00000381118 MS4A14Q96JA4 679 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 VCPIP1Q96JH7 1222 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 TNIP3Q96KP6 325 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 MCEEQ96PE7 176 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 MCOLN1Q9GZU1 580 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 HESX1Q9UBX0 185 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 KIAA1257Q9ULG3 409 aa8.46□□□□□ -1.05
ERCC8-202ENST00000381118 ALPK3Q96L96 1907 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 TRIM43BA6NCK2 446 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 TBKBP1A7MCY6 615 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 NT5C1B-RDH14C9J2C7 533 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 E5RJQ4 531 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 MYO1FO00160 1098 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 GABRDO14764 452 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 SPOPO43791 374 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 PFKMP08237 780 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 ODC1P11926 461 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 CSF2RAP15509 400 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 RAG1P15918 1043 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 TCP1P17987 556 aaKnown RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 EN2P19622 333 aaPredicted RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 TKTP29401 623 aaKnown RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 HADHBP55084 474 aaKnown RBP8.46□□□□□ -1.06
ERCC8-202ENST00000381118 PDE4CQ08493 712 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 IKBKEQ14164 716 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 MDH1BQ5I0G3 518 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 CCDC181Q5TID7 509 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 PLEKHA7Q6IQ23 1121 aa8.46□□□□□ -1.06
ERCC8-202ENST00000381118 PPP1R2P3Q6NXS1 205 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms