RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 APOBEC3GQ9HC16 384 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 FBXO40Q9UH90 709 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 ICAM1P05362 532 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 T-ENOLP0DO92 83 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 KRT4P19013 534 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 GTF2H1P32780 548 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 NEK3P51956 506 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 IRX4P78413 519 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 TMEM63BQ5T3F8 832 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 OLFML2BQ68BL8 750 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 RHOT1Q8IXI2 618 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 VCX3BQ9H321 246 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 VCX3AQ9NNX9 186 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 WHRNQ9P202 907 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 AGO2Q9UKV8 859 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 GGPS1O95749 300 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 RFX1P22670 979 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 RNF43Q68DV7 783 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 SNRNP27Q8WVK2 155 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 ABTB1Q969K4 478 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 SPATA16Q9BXB7 569 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 RNF146Q9NTX7 359 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 GINM1Q9NU53 330 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 KCND2Q9NZV8 630 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 FEM1BQ9UK73 627 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
PRPF40B-202ENST00000380281 CFAP69A5D8W1 941 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 MAGEA13PA6NCF6 341 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 FAM47DPA6NHR8 397 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 A6NJR5 290 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 SLC26A4O43511 780 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 NR3C2P08235 984 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ADRA1DP25100 572 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ATP5DP30049 168 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 TNFSF9P41273 254 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 BASP1P80723 227 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 TFAMQ00059 246 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 PRKCEQ02156 737 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ZBTB16Q05516 673 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 STRN3Q13033 797 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 MAMLD1Q13495 774 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 TFDP1Q14186 410 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 FAXCQ5TGI0 409 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 LVRNQ6Q4G3 990 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 KBTBD2Q8IY47 623 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 THNSL1Q8IYQ7 743 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 GRK7Q8WTQ7 553 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 MSTO1Q9BUK6 570 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 RPAP3Q9H6T3 665 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 KIAA1586Q9HCI6 787 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 GRID1Q9ULK0 1009 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ZNF510Q9Y2H8 683 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 PCDHB2Q9Y5E7 798 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ZNF541Q9H0D2 1346 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 K7ERI5 159 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 PROSCO94903 275 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 RTP1P59025 263 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 CYP1B1Q16678 543 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 CMPK2Q5EBM0 449 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 RHPN2Q8IUC4 686 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 GATA6Q92908 595 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 DNAJC1Q96KC8 554 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 TUBGCP5Q96RT8 1024 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ROPN1BQ9BZX4 212 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 SYNCQ9H7C4 482 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ROPN1Q9HAT0 212 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 UBE4BO95155 1302 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 TBX10O75333 385 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 GRAP2O75791 330 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ASNSP08243 561 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 UNGP13051 313 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 DESP17661 470 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 GPC3P51654 580 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 FSTL1Q12841 308 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 MTFR1Q15390 333 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 LRRC74BQ6ZQY2 392 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ANKRD35Q8N283 1001 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 DEPTORQ8TB45 409 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 HIC2Q96JB3 615 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 CALN1Q9BXU9 219 aa13.08□□□□□ -0.32
PRPF40B-202ENST00000380281 ZNF189O75820 626 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 RAP1GAPP47736 663 aa13.07□□□□□ -0.32
PRPF40B-202ENST00000380281 PTK6Q13882 451 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms