RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ROPN1BQ9BZX4 212 aaPredicted RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 ROPN1Q9HAT0 212 aaPredicted RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 FKBP14Q9NWM8 211 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 GRHL1Q9NZI5 618 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 ARFGEF1Q9Y6D6 1849 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 ABCB11O95342 1321 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 PNMA6FA0A0J9YX94 578 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 A6NL46 340 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CHEK2O96017 543 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 FOSP01100 380 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 HSPA1AP0DMV8 641 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 HSPA1BP0DMV9 641 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 HMOX2P30519 316 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 GUCY1A2P33402 732 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 RAP1GDS1P52306 607 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 WDR4P57081 412 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 AP3B2Q13367 1082 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 GJC2Q5T442 439 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PCNX4Q63HM2 1172 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 LPCAT4Q643R3 524 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 ITIH5Q86UX2 942 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CSGALNACT2Q8N6G5 542 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CCDC110Q8TBZ0 833 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PANX3Q96QZ0 392 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 SEZ6LQ9BYH1 1024 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 NCKIPSDQ9NZQ3 722 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 HDAC9Q9UKV0 1011 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PCDHGB4Q9UN71 923 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 DNAJC16Q9Y2G8 782 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PCDHGB5Q9Y5G0 923 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PIK3CDO00329 1044 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 KIAA0391O15091 583 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 BAIAP3O94812 1187 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CD48P09326 243 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 ATP1A4Q13733 1029 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 SLC15A2Q16348 729 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TRIM71Q2Q1W2 868 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TMEM63BQ5T3F8 832 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 OGFOD2Q6N063 350 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PPP1R21Q6ZMI0 780 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 DTHD1Q6ZMT9 781 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 RIPOR1Q6ZS17 1223 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TMEM179Q6ZVK1 233 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CHPT1Q8WUD6 406 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 GLG1Q92896 1179 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 GMCL1Q96IK5 515 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 FAM161BQ96MY7 647 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TCF12Q99081 682 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 MYL10Q9BUA6 226 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 UBN1Q9NPG3 1134 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CRNNQ9UBG3 495 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 ERVK-11Q9UQG0 969 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 C2CD2LO14523 706 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TXNDC9O14530 226 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TBX3O15119 743 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 ITM2AO43736 263 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 B4GALT4O60513 344 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 EDF1O60869 148 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TMCC2O75069 709 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PHF2O75151 1096 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 FARP2O94887 1054 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PLEKHA8P1O95397 391 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CYP1A2P05177 515 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 EIF2S1P05198 315 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 MMP10P09238 476 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 MUTP22033 750 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 DR1Q01658 176 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 KYNUQ16719 465 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 MAP3K21Q5TCX8 1036 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 NANOGP8Q6NSW7 305 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TATDN1Q6P1N9 297 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TTC23LQ6PF05 361 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 RNF111Q6ZNA4 994 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 ALLCQ8N6M5 410 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 LRRC57Q8N9N7 239 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 EXD1Q8NHP7 514 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 HCAR2Q8TDS4 363 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 FBXL18Q96ME1 805 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 XAB2Q9HCS7 855 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 CNGB3Q9NQW8 809 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PLK2Q9NYY3 685 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 TMOD2Q9NZR1 351 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 C6orf203Q9P0P8 240 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 THEGQ9P2T0 379 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 RSL24D1Q9UHA3 163 aaKnown RBP7.84□□□□□ -1.15
CDKL5-201ENST00000379989 GTF3C4Q9UKN8 822 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 NEU2Q9Y3R4 380 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 PCDHGA8Q9Y5G5 932 aa7.84□□□□□ -1.15
CDKL5-201ENST00000379989 SFI1A8K8P3 1242 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ZBTB11O95625 1053 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 ABCB1P08183 1280 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 RARGP13631 454 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 COPB2P35606 906 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 PGM1P36871 562 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 FXR2P51116 673 aaKnown RBP eCLIP7.83□□□□□ -1.16
CDKL5-201ENST00000379989 GTF2IP78347 998 aa7.83□□□□□ -1.16
CDKL5-201ENST00000379989 IL9RQ01113 521 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms