RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZSCAN26Q16670 478 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 SLC10A6Q3KNW5 377 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 WDR72Q3MJ13 1102 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 CEP128Q6ZU80 1094 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 POLNQ7Z5Q5 900 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 TMEM192Q8IY95 271 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 CCHCR1Q8TD31 782 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ZNF668Q96K58 619 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 GCOM2Q9BZD3 368 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 OSBPL8Q9BZF1 889 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 PABPC3Q9H361 631 aaKnown RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 NXF1Q9UBU9 619 aaKnown RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 POLIQ9UNA4 740 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 NRCAMQ92823 1304 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 SMIM35A0A1B0GVV1 85 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 A6NJR5 290 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 CILPO75339 1184 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 VDRP11473 427 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 RARGP13631 454 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 CD19P15391 556 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 GRK4P32298 578 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 RAD23BP54727 409 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 KRT17Q04695 432 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 PTPN11Q06124 597 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 INCA1Q0VD86 236 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ZNF268Q14587 947 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 C2CD6Q53TS8 623 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 DENND2CQ68D51 928 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 LLGL2Q6P1M3 1020 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 DRICH1Q6PGQ1 229 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 PHLDB2Q86SQ0 1253 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 CDR2LQ86X02 465 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 KIAA0319LQ8IZA0 1049 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 NPLOC4Q8TAT6 608 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 CXorf38Q8TB03 319 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 FBXO25Q8TCJ0 367 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 TFAP2BQ92481 460 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ZBTB9Q96C00 473 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ZBTB10Q96DT7 871 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 SNF8Q96H20 258 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 TMEM176AQ96HP8 235 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 CPB2Q96IY4 423 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 MCEEQ96PE7 176 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 TSPAN18Q96SJ8 248 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 HTATIP2Q9BUP3 242 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 RNF208Q9H0X6 261 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 UNC93B1Q9H1C4 597 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ATP8A1Q9Y2Q0 1164 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ALPK3Q96L96 1907 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 SIGLEC16A6NMB1 481 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 TJP3O95049 919 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 F2P00734 622 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 HMGCRP04035 888 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 RALAP11233 206 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 AXLP30530 894 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 SSR1P43307 286 aaKnown RBP11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 GABRB2P47870 512 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 CDR1P51861 262 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 IFFO1Q0D2I5 559 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 MYO1EQ12965 1108 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 NFX1Q12986 1120 aaKnown RBP11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 ACAP1Q15027 740 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 CNGA2Q16280 664 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 ZNF394Q53GI3 561 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 ODF2Q5BJF6 829 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 MORN1Q5T089 497 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 SCARA3Q6AZY7 606 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 DENND1BQ6P3S1 775 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 TRMT10CQ7L0Y3 403 aaKnown RBP11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 WDTC1Q8N5D0 677 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 SLC4A11Q8NBS3 891 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 C1orf54Q8WWF1 131 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 HPDLQ96IR7 371 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 TMEM109Q9BVC6 243 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 FRMD8P1Q9BZ68 369 aaPredicted RBP11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 FOXP3Q9BZS1 431 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 DPP3Q9NY33 737 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 BARX2Q9UMQ3 279 aaPredicted RBP11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 USTQ9Y2C2 406 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 EFR3BQ9Y2G0 817 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
POLR2J3-201ENST00000379340 MBLAC1A4D2B0 266 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 EIF3HO15372 352 aaKnown RBP eCLIP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 MEFVO15553 781 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 KRT1P04264 644 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 KRT7P08729 469 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 ATF2P15336 505 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 SSTR3P32745 418 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 KCNJ1P48048 391 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 IRAK1P51617 712 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 YARSP54577 528 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 PRMT2P55345 433 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 RPL7AP62424 266 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 GNGT1P63211 74 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 PRKCZQ05513 592 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 ADCY2Q08462 1091 aa11.05□□□□□ -0.64
POLR2J3-201ENST00000379340 HADHQ16836 314 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms