RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 OR4Q2P0C623 313 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
PCNA-201ENST00000379143 LMO2P25791 158 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 LTBRP36941 435 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 NDST1P52848 882 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
PCNA-201ENST00000379143 ITIH3Q06033 890 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 LRMPQ12912 555 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 FILIP1LQ4L180 1135 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 CES5AQ6NT32 575 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 FAM171BQ6P995 826 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 C4orf50Q6ZRC1 276 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
PCNA-201ENST00000379143 TATDN2Q93075 761 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 ELMO3Q96BJ8 720 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCNA-201ENST00000379143 MSLNLQ96KJ4 702 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 CYP4F11Q9HBI6 524 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 CLEC1BQ9P126 229 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 PCDHB5Q9Y5E4 795 aa12.71□□□□□ -0.37
PCNA-201ENST00000379143 MYO7AQ13402 2215 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 CILPO75339 1184 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 PAPLNO95428 1278 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 SPATA31D3P0C874 917 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 ATP1A3P13637 1013 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 PTPN1P18031 435 aaKnown RBP12.7□□□□□ -0.38
PCNA-201ENST00000379143 CD58P19256 250 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 SLC9A1P19634 815 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 KCNA5P22460 613 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 RFX1P22670 979 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 PON1P27169 355 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
PCNA-201ENST00000379143 MFAP3P55082 362 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 RBM10P98175 930 aaKnown RBP12.7□□□□□ -0.38
PCNA-201ENST00000379143 PLD1Q13393 1074 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
PCNA-201ENST00000379143 CFAP221Q4G0U5 840 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 PPM1LQ5SGD2 360 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 SPATA31D4Q6ZUB0 917 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 LRRTM3Q86VH5 581 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 CRYBG2Q8N1P7 616 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 SLC7A14Q8TBB6 771 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 PGLYRP2Q96PD5 576 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 PKMYT1Q99640 499 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 RHOBTB2Q9BYZ6 727 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 CD207Q9UJ71 328 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 FAM50BQ9Y247 325 aa12.7□□□□□ -0.38
PCNA-201ENST00000379143 CCDC195A0A1B0GUA6 201 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 XYLBO75191 536 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 SERPINC1P01008 464 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 LRG1P02750 347 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 POU2F2P09086 479 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 ALDH1A3P47895 512 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
PCNA-201ENST00000379143 DLX2Q07687 328 aaPredicted RBP12.69□□□□□ -0.38
PCNA-201ENST00000379143 DUSP4Q13115 394 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 LEXMQ3ZCV2 418 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 PHLDB3Q6NSJ2 640 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 SYCE2Q6PIF2 218 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
PCNA-201ENST00000379143 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
PCNA-201ENST00000379143 SMRP1Q8NCR6 262 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
PCNA-201ENST00000379143 ARID3AQ99856 593 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 PRKD2Q9BZL6 878 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 ADAM7Q9H2U9 754 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 UBE2TQ9NPD8 197 aaPredicted RBP12.69□□□□□ -0.38
PCNA-201ENST00000379143 PLCB1Q9NQ66 1216 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 ABI2Q9NYB9 513 aaPredicted RBP12.69□□□□□ -0.38
PCNA-201ENST00000379143 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 INSL5Q9Y5Q6 135 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
PCNA-201ENST00000379143 H3BQ06 376 aaPredicted RBP12.68□□□□□ -0.38
PCNA-201ENST00000379143 HCRTO43612 131 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 ATP2C2O75185 946 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 SEC24AO95486 1093 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 MAGEA11P43364 429 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 UBXN1Q04323 297 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
PCNA-201ENST00000379143 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
PCNA-201ENST00000379143 RARS2Q5T160 578 aaKnown RBP12.68□□□□□ -0.38
PCNA-201ENST00000379143 VSTM1Q6UX27 236 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms