RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 GRAP2O75791 330 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 CENPAP49450 140 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 RGS7P49802 495 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 EPHA7Q15375 998 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 MROH9Q5TGP6 573 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 LMBRD2Q68DH5 695 aaPredicted RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 WDR48Q8TAF3 677 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 SLC7A14Q8TBB6 771 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 ISCUQ9H1K1 167 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 COL15A1P39059 1388 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 ADGRA3Q8IWK6 1321 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 ZNF839A8K0R7 811 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 IRAK1P51617 712 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 KBTBD12Q3ZCT8 623 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 OR6J1Q8NGC5 347 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 TRIM10Q9UDY6 481 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 SNX9Q9Y5X1 595 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 FAM196BA6NMK8 535 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 NUP107P57740 925 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 SNRPFP62306 86 aaKnown RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 TSGA10IPQ3SY00 556 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 CAAP1Q9H8G2 361 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.67□□□□□ -0.54
RAD50-201ENST00000378823 IL1RAPL1Q9NZN1 696 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 PRRG1O14668 218 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 STRNO43815 780 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 EIF2S1P05198 315 aaKnown RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 PRIM2P49643 509 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 ITGA8P53708 1063 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 EDRF1Q3B7T1 1238 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 SRBD1Q8N5C6 995 aaKnown RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 DOLKQ9UPQ8 538 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 RGS2P41220 211 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 ARL4DP49703 201 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 DNAJC3Q13217 504 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 JAMLQ86YT9 394 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 IPMKQ8NFU5 416 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 THUMPD3Q9BV44 507 aaKnown RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 HPS4Q9NQG7 708 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 DCDC2Q9UHG0 476 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 PSMD14O00487 310 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 FOXN1O15353 648 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 RHOBTB3O94955 611 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 TGM2P21980 687 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 CENPCQ03188 943 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 TFDP3Q5H9I0 405 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 KRT78Q8N1N4 520 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 ZNF786Q8N393 782 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 USP13Q92995 863 aaPredicted RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 C19orf60Q96EN9 201 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 ZIM3Q96PE6 472 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 TUBGCP4Q9UGJ1 667 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 E2F8A0AVK6 867 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 ST13P5Q8NFI4 369 aaPredicted RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 KATNAL1Q9BW62 490 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 ASB14A6NK59 587 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 RXRBP28702 533 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 HARS2P49590 506 aaKnown RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 CHMP1BQ7LBR1 199 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 GLMNQ92990 594 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 SMARCAL1Q9NZC9 954 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 PCSK1P29120 753 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 SNX17Q15036 470 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 C3orf20Q8ND61 904 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 SIKE1Q9BRV8 207 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 APOL5Q9BWW9 433 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 ITIH4Q14624 930 aa11.66□□□□□ -0.54
RAD50-201ENST00000378823 MARCH10Q8NA82 808 aaPredicted RBP11.66□□□□□ -0.54
RAD50-201ENST00000378823 TMEM94Q12767 1356 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 COMTP21964 271 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 CACHD1Q5VU97 1274 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 LRRC6Q86X45 466 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 PAPOLBQ9NRJ5 636 aaKnown RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 SLC39A10Q9ULF5 831 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 KDM6AO15550 1401 aaPredicted RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 MAP3K13O43283 966 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 ALDH6A1Q02252 535 aaKnown RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 ARMCX4Q5H9R4 360 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 IER5Q5VY09 327 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 UNC45BQ8IWX7 931 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 USP38Q8NB14 1042 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 CELF4Q9BZC1 486 aaKnown RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 KCNF1Q9H3M0 494 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 GEMIN8Q9NWZ8 242 aaKnown RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 FAM153AQ9UHL3 310 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 NCAM1P13591 858 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 PTPN7P35236 360 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 PTGER2P43116 358 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 PEX5P50542 639 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 LAMC2Q13753 1193 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 SV2CQ496J9 727 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 ZRANB3Q5FWF4 1079 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms