RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 SLC18A3Q16572 532 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 CCDC142Q17RM4 750 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 GOLGA7BQ2TAP0 167 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 CTXN3Q4LDR2 81 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 MDH1BQ5I0G3 518 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 RTP2Q5QGT7 225 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 KIAA0319Q5VV43 1072 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 ZNF280DQ6N043 979 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 KIAA1841Q6NSI8 718 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 TOGARAM2Q6ZUX3 1019 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
CCDC107-204ENST00000378409 PALB2Q86YC2 1186 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 RNF168Q8IYW5 571 aaPredicted RBP16.76■□□□□ 0.27
CCDC107-204ENST00000378409 KLHL23Q8NBE8 558 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 OR10T2Q8NGX3 314 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 PCDHB18PQ96TA0 734 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 DESI2Q9BSY9 194 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 HERC2P3Q9BVR0 1158 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 CRTAC1Q9NQ79 661 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCDC107-204ENST00000378409 RWDD3Q9Y3V2 267 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 FAM170AA1A519 330 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 EIF3CLB5ME19 914 aaKnown RBP16.75■□□□□ 0.27
CCDC107-204ENST00000378409 H7C4K7 107 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 ARHGEF15O94989 841 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 BMP8BP34820 402 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 GLUD2P49448 558 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 MRPL58Q14197 206 aaKnown RBP16.75■□□□□ 0.27
CCDC107-204ENST00000378409 STILQ15468 1287 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 SPA17Q15506 151 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 CNGA2Q16280 664 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 INTS6LQ5JSJ4 861 aaKnown RBP16.75■□□□□ 0.27
CCDC107-204ENST00000378409 PPP1R26Q5T8A7 1209 aaPredicted RBP16.75■□□□□ 0.27
CCDC107-204ENST00000378409 TRIM72Q6ZMU5 477 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 ANKS3Q6ZW76 656 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 ACRBPQ8NEB7 543 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 SLC30A5Q8TAD4 765 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 RIN2Q8WYP3 895 aaPredicted RBP16.75■□□□□ 0.27
CCDC107-204ENST00000378409 CYFIP2Q96F07 1278 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 TMEM209Q96SK2 561 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 EIF3CQ99613 913 aaKnown RBP16.75■□□□□ 0.27
CCDC107-204ENST00000378409 C17orf80Q9BSJ5 609 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 MED10Q9BTT4 135 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 GTF3C4Q9UKN8 822 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 TSPAN16Q9UKR8 245 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 MTUS1Q9ULD2 1270 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 PCDHGC3Q9UN70 934 aa16.75■□□□□ 0.27
CCDC107-204ENST00000378409 YBX2Q9Y2T7 364 aaKnown RBP16.75■□□□□ 0.27
CCDC107-204ENST00000378409 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.74■□□□□ 0.27
CCDC107-204ENST00000378409 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.74■□□□□ 0.27
CCDC107-204ENST00000378409 MYBPHLA2RUH7 354 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 TMCO5BA8MYB1 307 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 M0QYV0 167 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 C2CD2LO14523 706 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 ZNF263O14978 683 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 MICAL2O94851 1124 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 ADORA2BP29275 332 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 PBX2P40425 430 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 CDR1P51861 262 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 PLCB3Q01970 1234 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 PSMD5Q16401 504 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 CLEC16AQ2KHT3 1053 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 CCDC122Q5T0U0 273 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 ARHGAP17Q68EM7 881 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 DENND1BQ6P3S1 775 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 ALKBH5Q6P6C2 394 aaKnown RBP16.74■□□□□ 0.27
CCDC107-204ENST00000378409 PRSS55Q6UWB4 352 aaPredicted RBP16.74■□□□□ 0.27
CCDC107-204ENST00000378409 TDHQ8IZJ6 230 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 VPS52Q8N1B4 723 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 MYCBPAPQ8TBZ2 947 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 SLC2A14Q8TDB8 520 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 PLVAPQ9BX97 442 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 CHST7Q9NS84 486 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 HESX1Q9UBX0 185 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 MSRAQ9UJ68 235 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 NAGPAQ9UK23 515 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 CEP83Q9Y592 693 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 PATJQ8NI35 1801 aa16.74■□□□□ 0.27
CCDC107-204ENST00000378409 OR6C75A6NL08 312 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 LCA5LO95447 670 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 URODP06132 367 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 OR4Q2P0C623 313 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 KRT83P78385 493 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 MAPRE1Q15691 268 aaKnown RBP16.73■□□□□ 0.27
CCDC107-204ENST00000378409 SLC39A12Q504Y0 691 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 LCLAT1Q6UWP7 414 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 SPRED2Q7Z698 418 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 DCP1BQ8IZD4 617 aaKnown RBP16.73■□□□□ 0.27
CCDC107-204ENST00000378409 UBA3Q8TBC4 463 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 MYLPFQ96A32 169 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 PCED1BQ96HM7 432 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 PKMYT1Q99640 499 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 HNRNPABQ99729 332 aaKnown RBP16.73■□□□□ 0.27
CCDC107-204ENST00000378409 OXCT2Q9BYC2 517 aaPredicted RBP16.73■□□□□ 0.27
CCDC107-204ENST00000378409 B3GNT5Q9BYG0 378 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 PBX4Q9BYU1 374 aa16.73■□□□□ 0.27
CCDC107-204ENST00000378409 ZCWPW1Q9H0M4 648 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms