RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 DBR1Q9UK59 544 aaKnown RBP14.69□□□□□ -0.06
TRIM13-202ENST00000378182 RCOR1Q9UKL0 485 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 RRN3P2A6NIE6 340 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 ATG4CQ96DT6 458 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 PIF1Q9H611 641 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 THG1LQ9NWX6 298 aaKnown RBP14.69□□□□□ -0.06
TRIM13-202ENST00000378182 VPS28Q9UK41 221 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 GSG1L2A8MUP6 293 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 ZNF185O15231 689 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 HBP1O60381 514 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 DGAT1O75907 488 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 AKAP5P24588 427 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 GRK3P35626 688 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 CLYBLQ8N0X4 340 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 TAAR1Q96RJ0 339 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 DDIT4Q9NX09 232 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 AMACRQ9UHK6 382 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 GPD1P21695 349 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 SEMA3FQ13275 785 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 TOB2Q14106 344 aaPredicted RBP14.69□□□□□ -0.06
TRIM13-202ENST00000378182 CEP78Q5JTW2 689 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 SYTL1Q8IYJ3 562 aa14.69□□□□□ -0.06
TRIM13-202ENST00000378182 NR3C2P08235 984 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 EPHB2P29323 1055 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 FEN1P39748 380 aaKnown RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 PRR5LQ6MZQ0 368 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 FAM96AQ9H5X1 160 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 CAND2O75155 1236 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 ABCB1P08183 1280 aaPredicted RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 LONRF1Q17RB8 773 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 DENND5BQ6ZUT9 1274 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 TFB1MQ8WVM0 346 aaKnown RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 VWA5AO00534 786 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 CNGA3Q16281 694 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 POM121L1PQ3SYA9 428 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 NBPF15Q8N660 670 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 TMEM245Q9H330 911 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 NEUROD4Q9HD90 331 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 CHD1O14646 1710 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 CSDE1O75534 798 aaKnown RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 TAF6P49848 677 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 DDX42Q86XP3 938 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 EXD1Q8NHP7 514 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 DTX3LQ8TDB6 740 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 SGF29Q96ES7 293 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 TCP11X1B4DZS4 312 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 STX7O15400 261 aaKnown RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 ACOX1Q15067 660 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 ZNF284Q2VY69 593 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 RARS2Q5T160 578 aaKnown RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 FAR2Q96K12 515 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 A0A087X0T9 212 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 ACADSBP45954 432 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 PLOD1Q02809 727 aaPredicted RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 TKFCQ3LXA3 575 aa14.68□□□□□ -0.06
TRIM13-202ENST00000378182 TRMT11Q7Z4G4 463 aaKnown RBP14.68□□□□□ -0.06
TRIM13-202ENST00000378182 CBX4O00257 560 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 UGT3A1Q6NUS8 523 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 NT5DC3Q86UY8 548 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 MMGT1Q8N4V1 131 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 KDM6AO15550 1401 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 FOXN1O15353 648 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 PIGHQ14442 188 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 USP39Q53GS9 565 aaKnown RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 ANO5Q75V66 913 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 HERC6Q8IVU3 1022 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 B3GALNT2Q8NCR0 500 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 SCFD2Q8WU76 684 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 TADA1Q96BN2 335 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 MTMR4Q9NYA4 1195 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 DYRK1BQ9Y463 629 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 RASSF10A6NK89 507 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 ACO1P21399 889 aaKnown RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 MRPS15P82914 257 aaKnown RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 FRMD5Q7Z6J6 570 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 ASCC2Q9H1I8 757 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 KRCC1Q9NPI7 259 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 HLA-DRAP01903 254 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 LAMB3Q13751 1172 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 ACOT1Q86TX2 421 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 ASZ1Q8WWH4 475 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 ALDH2P05091 517 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 TRADDQ15628 312 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 GSTA3Q16772 222 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 KIAA2013Q8IYS2 634 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 FAM71DQ8N9W8 422 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 GTF3C2Q8WUA4 911 aaPredicted RBP14.67□□□□□ -0.06
TRIM13-202ENST00000378182 APEX2Q9UBZ4 518 aa14.67□□□□□ -0.06
TRIM13-202ENST00000378182 RNF103O00237 685 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 MTSS1LQ765P7 747 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 NDE1Q9NXR1 346 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 TIMM13Q9Y5L4 95 aaPredicted RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 TCOF1Q13428 1488 aaKnown RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 EVPLLA8MZ36 301 aa14.66□□□□□ -0.06
TRIM13-202ENST00000378182 MARSP56192 900 aaKnown RBP14.66□□□□□ -0.06
TRIM13-202ENST00000378182 HIC1Q14526 733 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms