RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 LHX1P48742 406 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 FEZF2Q8TBJ5 459 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 GLG1Q92896 1179 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 CXCL11O14625 94 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 CRCPO75575 148 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 PECAM1P16284 738 aaPredicted RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 ATP6V1C1P21283 382 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 SCTRP47872 440 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TMPRSS15P98073 1019 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 DDX18Q9NVP1 670 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 BNIP1Q12981 228 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 METTL2AQ96IZ6 378 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 RDH12Q96NR8 316 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC40Q9H9A6 602 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 RAD18Q9NS91 495 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 MADDQ8WXG6 1647 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 PROSCO94903 275 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TYK2P29597 1187 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 SMIM11AP58511 58 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 CDH24Q86UP0 819 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 APOBEC3FQ8IUX4 373 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 ZFP69BQ9UJL9 534 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TUBA1BP68363 451 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TTC23Q5W5X9 447 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TUBA1AQ71U36 451 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 SLC5A5Q92911 643 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TRABDQ9H4I3 376 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 GPCPD1Q9NPB8 672 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 MAD2L2Q9UI95 211 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 ARPC4-TTLL3A0A0A6YYG9 625 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 PYGLP06737 847 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 IL12AP29459 219 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 EML1O00423 815 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 PLK4O00444 970 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 RIMBP2O15034 1052 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CAMTA2O94983 1202 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 MLYCDO95822 493 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 RAD23AP54725 363 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 FMR1Q06787 632 aaKnown RBP eCLIP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 PKN1Q16512 942 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 C1orf146Q5VVC0 180 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 DNPEPQ9ULA0 475 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 RGSL1A5PLK6 1076 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ACTR2P61160 394 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 PRKAA1Q13131 559 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 PLS1Q14651 629 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 RAD9BQ6WBX8 426 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ULK2Q8IYT8 1036 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 SNTG2Q9NY99 539 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 PCDHB4Q9Y5E5 795 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 A0A087WXM4 84 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM120BA0PK00 339 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ANTXR2P58335 489 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 METTL13Q8N6R0 699 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CPSF3Q9UKF6 684 aaKnown RBP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 DNAJC6O75061 913 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 BAIAP3O94812 1187 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 SLC35C1Q96A29 364 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CCDC138Q96M89 665 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CATSPERBQ9H7T0 1116 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 VPS72Q15906 364 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 HEATR6Q6AI08 1181 aaKnown RBP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 TIGD7Q6NT04 549 aaPredicted RBP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 OTOP1Q7RTM1 612 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 S100ZQ8WXG8 99 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 KLHL4Q9C0H6 718 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ATP1A1P05023 1023 aaKnown RBP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 OR9Q1Q8NGQ5 310 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 SLC25A23Q9BV35 468 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 FAM217BQ9NTX9 383 aaPredicted RBP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 RBM12Q9NTZ6 932 aaKnown RBP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 KPNA5O15131 536 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 GNPATO15228 680 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CCNB1P14635 433 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 DSG1Q02413 1049 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 MYBPC3Q14896 1274 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 FAM102BQ5T8I3 360 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CYB5R4Q7L1T6 521 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 SLC44A5Q8NCS7 719 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 MRRFQ96E11 262 aaKnown RBP5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L15C9J2P7 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L13C9JLJ4 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L11C9JVI0 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L18D6R9N7 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L22D6RA61 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L17D6RBQ6 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L19D6RCP7 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L20D6RJB6 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 LPXNO60711 386 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 USP17L24Q0WX57 530 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ANAPC7Q9UJX3 599 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CHSY1Q86X52 802 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 CEP70Q8NHQ1 597 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 NUP85Q9BW27 656 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 F8VZ95 297 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 NFKB1P19838 968 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 TKTL1P51854 596 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 ITGA1P56199 1179 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 BNIP2Q12982 314 aa5.15□□□□□ -1.59
PCDH9-201ENST00000377861 PLPPR4Q7Z2D5 763 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms