RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MYL2P10916 166 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 SERPINB9P50453 376 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 LRRC74AQ0VAA2 488 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.13
GPC6-201ENST00000377047 COG1Q8WTW3 980 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 NSMCE4AQ9NXX6 385 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 TBKBP1A7MCY6 615 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 RABGAP1LQ5R372 815 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 ACAD10Q6JQN1 1059 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 KIF2CQ99661 725 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 NDE1Q9NXR1 346 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 PTGER2P43116 358 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 METTL7BQ6UX53 244 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 TMC7Q7Z402 723 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 ADGRA1Q86SQ6 560 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 FAM83AQ86UY5 434 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 OOSP2Q86WS3 158 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 SAMD3Q8N6K7 520 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 ZNF513Q8N8E2 541 aaPredicted RBP14.21□□□□□ -0.14
GPC6-201ENST00000377047 DNERQ8NFT8 737 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 SYTL5Q8TDW5 730 aaPredicted RBP14.21□□□□□ -0.14
GPC6-201ENST00000377047 TMEM39AQ9NV64 488 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 DSEQ9UL01 958 aa14.21□□□□□ -0.14
GPC6-201ENST00000377047 H3BRB1 525 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 CSDE1O75534 798 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 SGO1Q5FBB7 561 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 GPC2Q8N158 579 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 IRX2Q9BZI1 471 aaPredicted RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 TUT1Q9H6E5 874 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 WARS2Q9UGM6 360 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 SNX5Q9Y5X3 404 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 USP32Q8NFA0 1604 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 RAG1P15918 1043 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 RPL10AP62906 217 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 GRIK4Q16099 956 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 NAPEPLDQ6IQ20 393 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 RFX8Q6ZV50 586 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 DNAJB3Q8WWF6 145 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 ECT2Q9H8V3 914 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 CHST12Q9NRB3 414 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 TRPM5Q9NZQ8 1165 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 A0A1W2PQJ5 194 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 MTSS1O43312 755 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 LZTS3O60299 673 aaPredicted RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 SGPL1O95470 568 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 SPRP35270 261 aaPredicted RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 SLC26A2P50443 739 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 ABCE1P61221 599 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 LAMTOR4Q0VGL1 99 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 EFEMP1Q12805 493 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 Q4G0T1 1027 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 C6orf10Q5SRN2 563 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 PATL1Q86TB9 770 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 PRMT1Q99873 361 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 HEATR9A2RTY3 570 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 KDM1AO60341 852 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 ALDH2P05091 517 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 RPLP2P05387 115 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 KRT4P19013 534 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 MZF1P28698 734 aaPredicted RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 PTK7Q13308 1070 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 WWP1Q9H0M0 922 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 PSMC3IPQ9P2W1 217 aaPredicted RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 FAM47DPA6NHR8 397 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
GPC6-201ENST00000377047 POMCP01189 267 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 RBP3P10745 1247 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 VDRP11473 427 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 MYL4P12829 197 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 PTK6Q13882 451 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 PGM5Q15124 567 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 MOXD1Q6UVY6 613 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 BLOC1S5Q8TDH9 187 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 ABHD8Q96I13 439 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 IL25Q9H293 177 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 GOLPH3Q9H4A6 298 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 SCUBE2Q9NQ36 999 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 TRIM17Q9Y577 477 aa14.2□□□□□ -0.14
GPC6-201ENST00000377047 ENDOD1O94919 500 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 C3orf67Q6ZVT6 689 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 ST13P4Q8IZP2 240 aaPredicted RBP14.19□□□□□ -0.14
GPC6-201ENST00000377047 DDI1Q8WTU0 396 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 SMARCAL1Q9NZC9 954 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 ALG6Q9Y672 507 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 TARSL2A2RTX5 802 aaKnown RBP14.19□□□□□ -0.14
GPC6-201ENST00000377047 ADORA2AP29274 412 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 ZNF280DQ6N043 979 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 NLRP14Q86W24 1093 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 NUP93Q8N1F7 819 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 POP1Q99575 1024 aaKnown RBP14.19□□□□□ -0.14
GPC6-201ENST00000377047 CGRRF1Q99675 332 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 FZD1Q9UP38 647 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 PREX1Q8TCU6 1659 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 PPP1R3GB7ZBB8 358 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 WNT10BO00744 389 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 IPPQ9Y573 584 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 CXCL11O14625 94 aa14.19□□□□□ -0.14
GPC6-201ENST00000377047 RNASEH1O60930 286 aaKnown RBP14.19□□□□□ -0.14
GPC6-201ENST00000377047 FGFR2P21802 821 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms