RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
TRIM40-206ENST00000376724 C3orf20Q8ND61 904 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 PXYLP1Q8TE99 480 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 ZNF296Q8WUU4 475 aaPredicted RBP13.67□□□□□ -0.22
TRIM40-206ENST00000376724 ZNF560Q96MR9 790 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 GLT1D1Q96MS3 346 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 GAD1Q99259 594 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 CHST12Q9NRB3 414 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 STRIP2Q9ULQ0 834 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRIM40-206ENST00000376724 TCRBV5S1A1TA0A578 114 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 ATP8B1O43520 1251 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 GPD2P43304 727 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 CARSP49589 748 aaKnown RBP13.66□□□□□ -0.22
TRIM40-206ENST00000376724 CLUL1Q15846 466 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 GOLGA7BQ2TAP0 167 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 ZFYVE27Q5T4F4 411 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 SMYD5Q6GMV2 418 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 RPAINQ86UA6 219 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 CCDC50Q8IVM0 306 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 DPEP3Q9H4B8 488 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 KIAA1257Q9ULG3 409 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 F8VP50 259 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 TTI1O43156 1089 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 FKTNO75072 461 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 CABYRO75952 493 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 RPLP2P05387 115 aaKnown RBP13.66□□□□□ -0.22
TRIM40-206ENST00000376724 KRT3P12035 628 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 LMO2P25791 158 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 PNPLA4P41247 253 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 OGDHQ02218 1023 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 ZNF252P-AS1Q0IIN9 211 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 PTK7Q13308 1070 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 PDCLQ13371 301 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 CASP8Q14790 479 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 SV2CQ496J9 727 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 LCLAT1Q6UWP7 414 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
TRIM40-206ENST00000376724 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 HACE1Q8IYU2 909 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 APPL2Q8NEU8 664 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 CCDC26Q8TAB7 109 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 CASKIN2Q8WXE0 1202 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 RUBCNQ92622 972 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 PPP1R10Q96QC0 940 aaKnown RBP13.66□□□□□ -0.22
TRIM40-206ENST00000376724 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 HMX1Q9NP08 348 aaPredicted RBP13.66□□□□□ -0.22
TRIM40-206ENST00000376724 GDF3Q9NR23 364 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 NFU1Q9UMS0 254 aa13.66□□□□□ -0.22
TRIM40-206ENST00000376724 MGEA5O60502 916 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 MYCP01106 439 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 FGFR1P11362 822 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 TCF4P15884 667 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 IGFBP6P24592 240 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 RFC1P35251 1148 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 GNL1P36915 607 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 RGS7P49802 495 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 LILRA4P59901 499 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 LPIN1Q14693 890 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 MAATS1Q7Z4T9 603 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 XYLT1Q86Y38 959 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 ZDHHC14Q8IZN3 488 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 EMC1Q8N766 993 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 ZNF784Q8NCA9 323 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 JOSD2Q8TAC2 188 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 KBTBD7Q8WVZ9 684 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 SNX25Q9H3E2 840 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 SLITRK6Q9H5Y7 841 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 FAM124BQ9H5Z6 455 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 KLHL11Q9NVR0 708 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 MIOSQ9NXC5 875 aa13.65□□□□□ -0.22
TRIM40-206ENST00000376724 PDCD11Q14690 1871 aaKnown RBP13.65□□□□□ -0.22
TRIM40-206ENST00000376724 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 MAP2K7O14733 419 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 HUS1O60921 280 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 GNRH1P01148 92 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 THP07101 528 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 GRK4P32298 578 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 PLA2G4AP47712 749 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 SCNN1GP51170 649 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 CDR1P51861 262 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 TAP1Q03518 808 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 ATP13A4Q4VNC1 1196 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 LHX8Q68G74 356 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 SND1Q7KZF4 910 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 ZNF771Q7L3S4 317 aaPredicted RBP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 KRT222Q8N1A0 295 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 PRELID2Q8N945 189 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 GSTCDQ8NEC7 633 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 AENQ8WTP8 325 aaKnown RBP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 MAGOHBQ96A72 148 aaKnown RBP13.64□□□□□ -0.23
TRIM40-206ENST00000376724 GDAP2Q9NXN4 497 aa13.64□□□□□ -0.23
TRIM40-206ENST00000376724 MTUS1Q9ULD2 1270 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms