RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 IFNB1P01574 187 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 PYGBP11216 843 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 AP1B1Q10567 949 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 CRY2Q49AN0 593 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 MFSD7Q6UXD7 560 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 ALYREFQ86V81 257 aaKnown RBP12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 C12orf56Q8IXR9 622 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 FBXL13Q8NEE6 735 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 ZFAND2BQ8WV99 257 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 SKA1Q96BD8 255 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 EPAS1Q99814 870 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 TEKT3Q9BXF9 490 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 MANSC1Q9H8J5 431 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 E5RJQ4 531 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 ALOX15BO15296 676 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 TROVE2P10155 538 aaKnown RBP eCLIP12.08□□□□□ -0.484e-12■□□□□ 8.9
TM9SF2-201ENST00000376387 ITGB5P18084 799 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 GLRA2P23416 452 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 RARRES1P49788 294 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 ARFIP2P53365 341 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 RPL7AP62424 266 aaKnown RBP12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 GTF2BQ00403 316 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 SLC5A9Q2M3M2 681 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 RNASEH2BQ5TBB1 312 aaKnown RBP12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 MON1BQ7L1V2 547 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 KATNAL2Q8IYT4 538 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 MZB1Q8WU39 189 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 GMCL1Q96IK5 515 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 TMEM8AQ9HCN3 771 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 FAM237BA0A1B0GVD1 139 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 NSFP46459 744 aaKnown RBP12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 ZBTB16Q05516 673 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 LAMB3Q13751 1172 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 UGCGQ16739 394 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 ABCB5Q2M3G0 1257 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 NCAPG2Q86XI2 1143 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 ALLCQ8N6M5 410 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 GORASP1Q9BQQ3 440 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 SYNCQ9H7C4 482 aa12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 AVENQ9NQS1 362 aaPredicted RBP12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 RPL26L1Q9UNX3 145 aaKnown RBP12.08□□□□□ -0.48
TM9SF2-201ENST00000376387 DENND3A2RUS2 1198 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 USP1O94782 785 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 POLR2MP0CAP2 368 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 BGNP21810 368 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 CRKP46108 304 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 ARL4CP56559 192 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 GEMIN4P57678 1058 aaKnown RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 SEPT7Q16181 437 aaKnown RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 DBN1Q16643 649 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 SPDYAQ5MJ70 313 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 PLA2G4FQ68DD2 849 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 SCARA3Q6AZY7 606 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 GMCL1P1Q8NEA9 526 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 TTC25Q96NG3 672 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 TUBGCP5Q96RT8 1024 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 TSSK1BQ9BXA7 367 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 STX18Q9P2W9 335 aaKnown RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 COQ4Q9Y3A0 265 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 EP400Q96L91 3159 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 TCRBV7S3A2A0A539 114 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 PSTPIP1O43586 416 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 ZWINTO95229 277 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 YY1P25490 414 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 WNT7BP56706 349 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 EFHC2Q5JST6 749 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 SLC39A4Q6P5W5 647 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 ZNF516Q92618 1163 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 STMN2Q93045 179 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 PAFAH2Q99487 392 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 NMUR2Q9GZQ4 415 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 RETREG1Q9H6L5 497 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 MAP3K7O43318 606 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 VIL1P09327 827 aaKnown RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 DLDP09622 509 aaKnown RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 ESRRAP11474 423 aaPredicted RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 GDF10P55107 478 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 PTP4A2Q12974 167 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 EAPPQ56P03 285 aaPredicted RBP12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 TATDN1Q6P1N9 297 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 FAM196AQ6ZSG2 479 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 BANPQ8N9N5 519 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 EXD1Q8NHP7 514 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 IL31RAQ8NI17 732 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 DHRS1Q96LJ7 313 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 FAM161BQ96MY7 647 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 SLITRK1Q96PX8 696 aa12.07□□□□□ -0.48
TM9SF2-201ENST00000376387 ZNF184Q99676 751 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms