RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 ZDHHC14Q8IZN3 488 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 MLKLQ8NB16 471 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 OR6B3Q8NGW1 331 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 GPR152Q8TDT2 470 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 ING5Q8WYH8 240 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
C11orf88-202ENST00000375618 CORO1BQ9BR76 489 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 BCO2Q9BYV7 579 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 SMOC2Q9H3U7 446 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 ZNF334Q9HCZ1 680 aaPredicted RBP17.08■□□□□ 0.32
C11orf88-202ENST00000375618 LIMD1Q9UGP4 676 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 CDH9Q9ULB4 789 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 NR2E1Q9Y466 385 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 DOCK8Q8NF50 2099 aa17.08■□□□□ 0.32
C11orf88-202ENST00000375618 FAM163BP0C2L3 166 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 GJA1P17302 382 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 CEBPBP17676 345 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 GBP2P32456 591 aaPredicted RBP17.07■□□□□ 0.32
C11orf88-202ENST00000375618 ORC1Q13415 861 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 CCDC40Q4G0X9 1142 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 SDHAF4Q5VUM1 108 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 OTOP3Q7RTS5 596 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 TRIM59Q8IWR1 403 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 GIPC2Q8TF65 315 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 TAF4BQ92750 862 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 MYLPFQ96A32 169 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 SNX25Q9H3E2 840 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 TMEM63CQ9P1W3 806 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 HSFX1Q9UBD0 423 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 COQ4Q9Y3A0 265 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
C11orf88-202ENST00000375618 CLSTN1O94985 981 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 LAMP2P13473 410 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 PTPN2P17706 415 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 CACNA2D1P54289 1103 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 EPHA5P54756 1037 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 MARSP56192 900 aaKnown RBP17.06■□□□□ 0.32
C11orf88-202ENST00000375618 NFE2Q16621 373 aaPredicted RBP17.06■□□□□ 0.32
C11orf88-202ENST00000375618 MDH1BQ5I0G3 518 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 NPAS3Q8IXF0 933 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 C2orf15Q8WU43 125 aaKnown RBP17.06■□□□□ 0.32
C11orf88-202ENST00000375618 RSAD2Q8WXG1 361 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 FGF13Q92913 245 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 TATDN2Q93075 761 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 PCED1BQ96HM7 432 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 TWNKQ96RR1 684 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 ARID3AQ99856 593 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 METTL14Q9HCE5 456 aaKnown RBP17.06■□□□□ 0.32
C11orf88-202ENST00000375618 AVENQ9NQS1 362 aaPredicted RBP17.06■□□□□ 0.32
C11orf88-202ENST00000375618 TMEM30AQ9NV96 361 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 RAB20Q9NX57 234 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 EPS15L1Q9UBC2 864 aa17.06■□□□□ 0.32
C11orf88-202ENST00000375618 A8MXQ7 604 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 PI4K2BG5E9Z4 385 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 CLDN5O00501 218 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 MBD3O95983 291 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 PTPN1P18031 435 aaKnown RBP17.05■□□□□ 0.32
C11orf88-202ENST00000375618 ALDH1A3P47895 512 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 FMO5P49326 533 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 MTMR3Q13615 1198 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 DDR2Q16832 855 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 DNAJB7Q7Z6W7 309 aaPredicted RBP17.05■□□□□ 0.32
C11orf88-202ENST00000375618 FBXL13Q8NEE6 735 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 SHKBP1Q8TBC3 707 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 MYCBPAPQ8TBZ2 947 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 WHAMMQ8TF30 809 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 ZNF512Q96ME7 567 aaPredicted RBP17.05■□□□□ 0.32
C11orf88-202ENST00000375618 B3GNT5Q9BYG0 378 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 NIF3L1Q9GZT8 377 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 ABCB6Q9NP58 842 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 CDH7Q9ULB5 785 aa17.05■□□□□ 0.32
C11orf88-202ENST00000375618 MRPS23Q9Y3D9 190 aaKnown RBP17.05■□□□□ 0.32
C11orf88-202ENST00000375618 BDP1A6H8Y1 2624 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 STX10O60499 249 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 MYL4P12829 197 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 HMGA1P17096 107 aaKnown RBP17.04■□□□□ 0.32
C11orf88-202ENST00000375618 BDNFP23560 247 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 TUFMP49411 452 aaKnown RBP17.04■□□□□ 0.32
C11orf88-202ENST00000375618 NDST1P52848 882 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 EPHB3P54753 998 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 CFAP221Q4G0U5 840 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 PAQR9Q6ZVX9 377 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 ACOT1Q86TX2 421 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 SPATA2LQ8IUW3 424 aaPredicted RBP17.04■□□□□ 0.32
C11orf88-202ENST00000375618 B3GALNT2Q8NCR0 500 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 LMO3Q8TAP4 145 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 PSMG2Q969U7 264 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 ACSF2Q96CM8 615 aaPredicted RBP17.04■□□□□ 0.32
C11orf88-202ENST00000375618 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
C11orf88-202ENST00000375618 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
C11orf88-202ENST00000375618 ZNF518BQ9C0D4 1074 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 IL21Q9HBE4 155 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 C11orf16Q9NQ32 467 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.04■□□□□ 0.32
C11orf88-202ENST00000375618 PTPRDP23468 1912 aa17.04■□□□□ 0.32
C11orf88-202ENST00000375618 CUL9Q8IWT3 2517 aa17.03■□□□□ 0.32
C11orf88-202ENST00000375618 ANHXE9PGG2 379 aa17.03■□□□□ 0.32
C11orf88-202ENST00000375618 DCXO43602 365 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms