RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SPIDRQ14159 915 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 FHL2Q14192 279 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 SEPT7Q16181 437 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 STX1AQ16623 288 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 ANO6Q4KMQ2 910 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 FKBP15Q5T1M5 1219 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 ADALQ6DHV7 355 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 CPLX2Q6PUV4 134 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 SARM1Q6SZW1 724 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 SASS6Q6UVJ0 657 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 Q6ZRM9 215 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 HTR3DQ70Z44 454 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 CCAR1Q8IX12 1150 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 OR2W6PQ8NHA6 318 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 KCNG4Q8TDN1 519 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 MRPS27Q92552 414 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 MPHOSPH8Q99549 860 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 WNT8AQ9H1J5 351 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 SPTLC3Q9NUV7 552 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 ORC3Q9UBD5 711 aaPredicted RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 MSRAQ9UJ68 235 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 ING1Q9UK53 422 aaPredicted RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 NAP1L2Q9ULW6 460 aaPredicted RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 NEDD4P46934 1319 aa5.45□□□□□ -1.54
USP48-202ENST00000374730 PDS5AQ29RF7 1337 aaKnown RBP5.45□□□□□ -1.54
USP48-202ENST00000374730 FAM237AA0A1B0GTK4 181 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 ZBTB43O43298 467 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 SUV39H1O43463 412 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 SEC24DO94855 1032 aaPredicted RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 MBD4O95243 580 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 ME1P48163 572 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 METAP2P50579 478 aaKnown RBP eCLIP5.44□□□□□ -1.54
USP48-202ENST00000374730 SCNN1GP51170 649 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 NPEPPSP55786 919 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 PURAQ00577 322 aaKnown RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 GUCY1B3Q02153 619 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 KIF23Q02241 960 aaPredicted RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 CHRNDQ07001 517 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 IQCB1Q15051 598 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 STK38Q15208 465 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 SF3B3Q15393 1217 aaKnown RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 CAMK4Q16566 473 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 ZBTB41Q5SVQ8 909 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 TMED8Q6PL24 325 aaPredicted RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 APOA5Q6Q788 366 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 PLA2G4DQ86XP0 818 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 MAGEB6Q8N7X4 407 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 FSIP1Q8NA03 581 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 LINC00301Q8NCQ3 95 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 ZNF483Q8TF39 744 aaPredicted RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 STAG1Q8WVM7 1258 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 ARL8AQ96BM9 186 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 GPR101Q96P66 508 aaPredicted RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 KRT23Q9C075 422 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 FTOQ9C0B1 505 aaKnown RBP eCLIP5.44□□□□□ -1.54
USP48-202ENST00000374730 NAPBQ9H115 298 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 GOLPH3LQ9H4A5 285 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 LY9Q9HBG7 655 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 ANO10Q9NW15 660 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 PCDHA7Q9UN72 937 aa5.44□□□□□ -1.54
USP48-202ENST00000374730 NIP7Q9Y221 180 aaKnown RBP eCLIP5.44□□□□□ -1.54
USP48-202ENST00000374730 COL1A1P02452 1464 aaPredicted RBP5.44□□□□□ -1.54
USP48-202ENST00000374730 TNRC6CQ9HCJ0 1690 aaKnown RBP5.43□□□□□ -1.54
USP48-202ENST00000374730 NAV1Q8NEY1 1877 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 CDK5RAP2Q96SN8 1893 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 GOLGA8AA7E2F4 631 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 GSG1L2A8MUP6 293 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 KIF28PB7ZC32 967 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 SPTLC2O15270 562 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 NRP2O60462 931 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 PPP6R2O75170 966 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 PCDH8O95206 1070 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 PCP11498 1178 aaKnown RBP5.43□□□□□ -1.54
USP48-202ENST00000374730 IFNAR1P17181 557 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 MAKP20794 623 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 ADCYAP1R1P41586 468 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 ZNF75DP51815 510 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 RABGGTBP53611 331 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 TGFB2P61812 414 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 CEBPZQ03701 1054 aaKnown RBP5.43□□□□□ -1.54
USP48-202ENST00000374730 UBE4AQ14139 1066 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 TERF2Q15554 542 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 DCAF17Q5H9S7 520 aaPredicted RBP5.43□□□□□ -1.54
USP48-202ENST00000374730 SLC10A5Q5PT55 438 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 FNDC7Q5VTL7 733 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 ANO1Q5XXA6 986 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 APBB1IPQ7Z5R6 666 aaPredicted RBP5.43□□□□□ -1.54
USP48-202ENST00000374730 LUZP1Q86V48 1076 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 C11orf74Q86VG3 221 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 GSPT2Q8IYD1 628 aaKnown RBP5.43□□□□□ -1.54
USP48-202ENST00000374730 PIK3C3Q8NEB9 887 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 MDGA1Q8NFP4 955 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 KIAA1524Q8TCG1 905 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 RSAD2Q8WXG1 361 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 WASF1Q92558 559 aa5.43□□□□□ -1.54
USP48-202ENST00000374730 ZNF512Q96ME7 567 aaPredicted RBP5.43□□□□□ -1.54
USP48-202ENST00000374730 TIGD1Q96MW7 591 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms