RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 UBE2TQ9NPD8 197 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-201ENST00000374673 PLCB1Q9NQ66 1216 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 TMLHEQ9NVH6 421 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 CLEC1BQ9P126 229 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 GTF3C4Q9UKN8 822 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 SIK3Q9Y2K2 1263 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 PAPLNO95428 1278 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 SPATA31D3P0C874 917 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 PTPN1P18031 435 aaKnown RBP16■□□□□ 0.15
HSPG2-201ENST00000374673 TRIM21P19474 475 aaKnown RBP16■□□□□ 0.15
HSPG2-201ENST00000374673 ACO1P21399 889 aaKnown RBP16■□□□□ 0.15
HSPG2-201ENST00000374673 RFX1P22670 979 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 ELF1P32519 619 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 MFAP3P55082 362 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 APBA1Q02410 837 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 SKIV2LQ15477 1246 aaKnown RBP16■□□□□ 0.15
HSPG2-201ENST00000374673 UVSSAQ2YD98 709 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 LIN9Q5TKA1 542 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 GJB7Q6PEY0 223 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 SPATA31D4Q6ZUB0 917 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 CCDC149Q6ZUS6 474 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 GAS2L3Q86XJ1 694 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 MYCBPAPQ8TBZ2 947 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
HSPG2-201ENST00000374673 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
HSPG2-201ENST00000374673 LSM14BQ9BX40 385 aaKnown RBP16■□□□□ 0.15
HSPG2-201ENST00000374673 ELOVL4Q9GZR5 314 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 DNAI2Q9GZS0 605 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 UBE2ZQ9H832 354 aaPredicted RBP16■□□□□ 0.15
HSPG2-201ENST00000374673 SFXN1Q9H9B4 322 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 DAAM1Q9Y4D1 1078 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 PCDHB5Q9Y5E4 795 aa16■□□□□ 0.15
HSPG2-201ENST00000374673 TEX33O43247 280 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 ZMYND10O75800 440 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 SEC24AO95486 1093 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 C8AP07357 584 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 HOXB8P17481 243 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-201ENST00000374673 HOXA9P31269 272 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 RAD23BP54727 409 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 UBASH3AP57075 661 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-201ENST00000374673 NR1I3Q14994 352 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 SYCP1Q15431 976 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 CCDC142Q17RM4 750 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 CFAP221Q4G0U5 840 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 MDH1BQ5I0G3 518 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 KLHDC7AQ5VTJ3 777 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 C4orf50Q6ZRC1 276 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 ACOT1Q86TX2 421 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 ATAD1Q8NBU5 361 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 CMASQ8NFW8 434 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-201ENST00000374673 MYLPFQ96A32 169 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 PCED1BQ96HM7 432 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 MSLNLQ96KJ4 702 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 RBSNQ9H1K0 784 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 GANQ9H2C0 597 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 CRISPLD1Q9H336 500 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 CYP4F11Q9HBI6 524 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 ABCB6Q9NP58 842 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 ZDHHC7Q9NXF8 308 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 DNAJC12Q9UKB3 198 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 COG5Q9UP83 839 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 CNTN6Q9UQ52 1028 aa15.99■□□□□ 0.15
HSPG2-201ENST00000374673 C2orf16Q68DN1 1984 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 A0A1W2PQC6 194 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 NOL4O94818 638 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 HNRNPA1P09651 372 aaKnown RBP eCLIP15.98■□□□□ 0.15
HSPG2-201ENST00000374673 UCHL3P15374 230 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 KLK7P49862 253 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 DUSP4Q13115 394 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 ORC1Q13415 861 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 ZNF394Q53GI3 561 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 PPM1LQ5SGD2 360 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 IQCEQ6IPM2 695 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 SYCE2Q6PIF2 218 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 TMEM270Q6UE05 265 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 EP400NLQ6ZTU2 488 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 SPATA2LQ8IUW3 424 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-201ENST00000374673 SLC4A11Q8NBS3 891 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 SLC7A14Q8TBB6 771 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 SHC3Q92529 594 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 HLA-CQ95604 372 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 TMEM176AQ96HP8 235 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 LPIN3Q9BQK8 851 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 NAA15Q9BXJ9 866 aaKnown RBP15.98■□□□□ 0.15
HSPG2-201ENST00000374673 ABI2Q9NYB9 513 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-201ENST00000374673 AJAP1Q9UKB5 411 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-201ENST00000374673 PCDHB4Q9Y5E5 795 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 INSL5Q9Y5Q6 135 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 FHOD1Q9Y613 1164 aa15.98■□□□□ 0.15
HSPG2-201ENST00000374673 MYH10P35580 1976 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 SPDYE4A6NLX3 237 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 PRRG1O14668 218 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 POU2F2P09086 479 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 PAEPP09466 180 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 HAPLN1P10915 354 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-201ENST00000374673 MAGEA11P43364 429 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 TUFMP49411 452 aaKnown RBP15.97■□□□□ 0.15
HSPG2-201ENST00000374673 ZNF132P52740 706 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 CYP27A1Q02318 531 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms