RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 NFKBIZQ9BYH8 718 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 CIPCQ9C0C6 399 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PARVBQ9HBI1 364 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 IL1RAPL1Q9NZN1 696 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 WDR91A4D1P6 747 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TBC1D3BA6NDS4 549 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PSMD3O43242 534 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 HMBSP08397 361 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 BRAFP15056 766 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PSMC5P62195 406 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TEAD4Q15561 434 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 HDDC2Q7Z4H3 204 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 CLEC10AQ8IUN9 316 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 LRRC71Q8N4P6 559 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 HIPK4Q8NE63 616 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 MAML3Q96JK9 1138 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 GINS4Q9BRT9 223 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 MTA3Q9BTC8 594 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 FAM129AQ9BZQ8 928 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 WNT8AQ9H1J5 351 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TMEM245Q9H330 911 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 KLHL8Q9P2G9 620 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 DCDC2Q9UHG0 476 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 GPR75-ASB3A0A0A6YYF3 556 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 LGALS16A8MUM7 142 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 MMP3P08254 477 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PDHA1P08559 390 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TJAP1Q5JTD0 557 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF484Q5JVG2 852 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SPATA21Q7Z572 469 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 BRI3BPQ8WY22 251 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SGSM3Q96HU1 749 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SPON2Q9BUD6 331 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PLA2G12BQ9BX93 195 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 FSD1LQ9BXM9 530 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SPG21Q9NZD8 308 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PVALEFA0A1B0GWK0 134 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 H0YGN5 161 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 DNAJC6O75061 913 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 SUPT3HO75486 399 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 NPTXRO95502 500 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 EIF2S1P05198 315 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 IGKV5-2P06315 115 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 SERPINB9P50453 376 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 GPC3P51654 580 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF667Q5HYK9 610 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 WLSQ5T9L3 541 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 DEPDC1Q5TB30 811 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 RWDD4Q6NW29 188 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 PPP1R18Q6NYC8 613 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 RASSF3Q86WH2 238 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 CDR2LQ86X02 465 aaPredicted RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 C3orf20Q8ND61 904 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 TBCKQ8TEA7 893 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 HASPINQ8TF76 798 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 DDI1Q8WTU0 396 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 ASIC4Q96FT7 647 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 RUBCNLQ9H714 662 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 SLC24A3Q9HC58 644 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 IP6K2Q9UHH9 426 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 PCDHB8Q9UN66 801 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 TSC22D4Q9Y3Q8 395 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 ANGPT2O15123 496 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 MEFVO15553 781 aaPredicted RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 SPAG6O75602 509 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 TCF3P15923 654 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 CDC27P30260 824 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 NUP107P57740 925 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 MAGOHP61326 146 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 PURAQ00577 322 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 TP53BP2Q13625 1128 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 TMEM132DQ14C87 1099 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 CNGA3Q16281 694 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 UGP2Q16851 508 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 FAM171A1Q5VUB5 890 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 UNC13DQ70J99 1090 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 ZSCAN1Q8NBB4 408 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 TCF25Q9BQ70 676 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 CORO1BQ9BR76 489 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 TRIM8Q9BZR9 551 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 RANBP17Q9H2T7 1088 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 NSMCE4AQ9NXX6 385 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 RGPD1P0DJD0 1748 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 DDTLA6NHG4 134 aaPredicted RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 POMCP01189 267 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 ICAM1P05362 532 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 ACADSP16219 412 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 PGM1P36871 562 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 QARSP47897 775 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 LBRQ14739 615 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 GRIK4Q16099 956 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 RABGAP1LQ5R372 815 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 FAM47EQ6ZV65 393 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 DGKHQ86XP1 1220 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 SETD7Q8WTS6 366 aaKnown RBP6.57□□□□□ -1.36
PTPN3-202ENST00000374541 SCLYQ96I15 445 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 VPS11Q9H270 941 aa6.57□□□□□ -1.36
PTPN3-202ENST00000374541 SMYD3Q9H7B4 428 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms