RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 TTLL13PA6NNM8 815 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 NFKBIAP25963 317 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 NSFP46459 744 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 KLHL12Q53G59 568 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 ARMC4Q5T2S8 1044 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 ACAD11Q709F0 780 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 EEPD1Q7L9B9 569 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 YTHDF3Q7Z739 585 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 RBM41Q96IZ5 413 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 TEX13BQ9BXU2 312 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 PLGRKTQ9HBL7 147 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 RPRD1BQ9NQG5 326 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 PPP2R3BQ9Y5P8 575 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 SNED1Q8TER0 1413 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 NCK2O43639 380 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 MAGEA8P43361 318 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 CLK1P49759 484 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 BYSLQ13895 437 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 COG2Q14746 738 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 RINT1Q6NUQ1 792 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 PLEKHM3Q6ZWE6 761 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 PPP2R3CQ969Q6 453 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 VPS50Q96JG6 964 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 RHOBTB2Q9BYZ6 727 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 JPH1Q9HDC5 661 aaPredicted RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 NSMCE4AQ9NXX6 385 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 UBE4BO95155 1302 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 LOXHD1Q8IVV2 1947 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 TSPAN4O14817 238 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 PJA2O43164 708 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 CNOT3O75175 753 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 PALMO75781 387 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 KITP10721 976 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 FKBP3Q00688 224 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 CRELD2Q6UXH1 353 aaPredicted RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 GDPD5Q8WTR4 605 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 CDKL2Q92772 493 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 TTC25Q96NG3 672 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 GGA2Q9UJY4 613 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 STMND1H3BQB6 276 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 HNRNPDLO14979 420 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 BCL10O95999 233 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 AFPP02771 609 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 SFNP31947 248 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 IFNA8P32881 189 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 FUT2Q10981 343 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 FASTKD5Q7L8L6 764 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 TMX2Q9Y320 296 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 RBMX2Q9Y388 322 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 A0A1W2PRG6 482 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 MYMKA6NI61 221 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 SNPHO15079 494 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 FGFR4P22455 802 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 BFSP1Q12934 665 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 NBPF12Q5TAG4 269 aaPredicted RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 CEP170P1Q96L14 293 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 WBP11Q9Y2W2 641 aaKnown RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 FAM58BPP0C7Q3 252 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 HSPA1AP0DMV8 641 aaKnown RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 HSPA1BP0DMV9 641 aaKnown RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 PYGMP11217 842 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 ATP6V1E1P36543 226 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 EXOC3L4Q17RC7 722 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 EARS2Q5JPH6 523 aaKnown RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 WDR93Q6P2C0 686 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 FUKQ8N0W3 1084 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 C2orf69Q8N8R5 385 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 NOA1Q8NC60 698 aaKnown RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 GIMAP8Q8ND71 665 aaPredicted RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 SMARCAD1Q9H4L7 1026 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 TRIM45Q9H8W5 580 aaPredicted RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 COG4Q9H9E3 785 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 A0A1B0GTH6 734 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 SERPING1P05155 500 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 SAT1P21673 171 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 CIITAP33076 1130 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 AARSP49588 968 aaKnown RBP eCLIP6.87□□□□□ -1.31
CHD6-203ENST00000373233 ARPP19P56211 112 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 SNAPC2Q13487 334 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 RBBP8NLQ8NC74 664 aaPredicted RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 STK32AQ8WU08 396 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 ATG4CQ96DT6 458 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 PCDH12Q9NPG4 1184 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 ADAMTSL1Q8N6G6 1762 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 COPEO14579 308 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 CLIC2O15247 247 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 GPC2Q8N158 579 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 STX19Q8N4C7 294 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 CITED4Q96RK1 184 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 TNFAIP8O95379 198 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 PSMC3P17980 439 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 TFDP1Q14186 410 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 TBCCQ15814 346 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 SHROOM1Q2M3G4 852 aaPredicted RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 ZCCHC7Q8N3Z6 543 aaKnown RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 INPP5DQ92835 1189 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 AURKCQ9UQB9 309 aa6.87□□□□□ -1.31
CHD6-203ENST00000373233 DDX60LQ5H9U9 1706 aaKnown RBP6.87□□□□□ -1.31
CHD6-203ENST00000373233 FOCADQ5VW36 1801 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms