RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SCAND2PQ9GZW5 306 aaPredicted RBP20.27■□□□□ 0.84
TMEM53-201ENST00000372235 EXOC1Q9NV70 894 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 SPATA6Q9NWH7 488 aaPredicted RBP20.27■□□□□ 0.84
TMEM53-201ENST00000372235 EHD2Q9NZN4 543 aa20.27■□□□□ 0.84
TMEM53-201ENST00000372235 PRR23AA6NEV1 266 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 TGFB1I1O43294 461 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 ATF6P18850 670 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 HOXD13P35453 343 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 VIPR2P41587 438 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 WNT7BP56706 349 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 SPATA2LQ8IUW3 424 aaPredicted RBP20.26■□□□□ 0.83
TMEM53-201ENST00000372235 TTC9BQ8N6N2 239 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 FAM3CQ92520 227 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 CGRRF1Q99675 332 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 LPIN3Q9BQK8 851 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 BLZF1Q9H2G9 400 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 SIX4Q9UIU6 781 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 CDH9Q9ULB4 789 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
TMEM53-201ENST00000372235 SOAT2O75908 522 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 DLATP10515 647 aaKnown RBP20.25■□□□□ 0.83
TMEM53-201ENST00000372235 AVPR1AP37288 418 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 CYP24A1Q07973 514 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 POTEHQ6S545 545 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 TRAPPC11Q7Z392 1133 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 NELFCDQ8IXH7 590 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 CELF5Q8N6W0 485 aaKnown RBP20.25■□□□□ 0.83
TMEM53-201ENST00000372235 RDH13Q8NBN7 331 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 GLIS3Q8NEA6 775 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 TMEM174Q8WUU8 243 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 MRPS31Q92665 395 aaKnown RBP20.25■□□□□ 0.83
TMEM53-201ENST00000372235 KIF9Q9HAQ2 790 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 SLC39A2Q9NP94 309 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 PIAS3Q9Y6X2 628 aa20.25■□□□□ 0.83
TMEM53-201ENST00000372235 EXOC3O60645 756 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 SP9P0CG40 484 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 ATICP31939 592 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 MAGEA11P43364 429 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 CYP2J2P51589 502 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 TRPC3Q13507 836 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 CUL4BQ13620 913 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 PKP1Q13835 747 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 VSTM1Q6UX27 236 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 MAMSTRQ6ZN01 415 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 FSIP1Q8NA03 581 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 OR5B17Q8NGF7 314 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 BPIFB1Q8TDL5 484 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 GIPC2Q8TF65 315 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 TRMT2BQ96GJ1 504 aaKnown RBP20.24■□□□□ 0.83
TMEM53-201ENST00000372235 PAGE5Q96GU1 130 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 MMS19Q96T76 1030 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 PI4K2AQ9BTU6 479 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 FAM126AQ9BYI3 521 aaPredicted RBP20.24■□□□□ 0.83
TMEM53-201ENST00000372235 SERTAD1Q9UHV2 236 aa20.24■□□□□ 0.83
TMEM53-201ENST00000372235 MIA3Q5JRA6 1907 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 CLIC2O15247 247 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 STAU1O95793 577 aaKnown RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 LMNAP02545 664 aaKnown RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 WARSP23381 471 aaKnown RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 TARSP26639 723 aaKnown RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 PDE6CP51160 858 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 KPNA1P52294 538 aaPredicted RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 TNNC1P63316 161 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 AMPD2Q01433 879 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 LRRC32Q14392 662 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 LIMS2Q7Z4I7 341 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 RALGPS2Q86X27 583 aaPredicted RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 CMTM8Q8IZV2 173 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 SYAP1Q96A49 352 aaPredicted RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 EXOC4Q96A65 974 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 SNX25Q9H3E2 840 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 IL21Q9HBE4 155 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 MAGEC2Q9UBF1 373 aaPredicted RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 GTF3C4Q9UKN8 822 aa20.23■□□□□ 0.83
TMEM53-201ENST00000372235 MTF2Q9Y483 593 aaPredicted RBP20.23■□□□□ 0.83
TMEM53-201ENST00000372235 ACTN4O43707 911 aaKnown RBP20.22■□□□□ 0.83
TMEM53-201ENST00000372235 PHACTR2O75167 634 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 TACC1O75410 805 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 PFKFB1P16118 471 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 CD72P21854 359 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 SYKP43405 635 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 NRLP54845 237 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 NLRP12P59046 1061 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 LMBRD2Q68DH5 695 aaPredicted RBP20.22■□□□□ 0.83
TMEM53-201ENST00000372235 FAM171BQ6P995 826 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 ASCL5Q7RTU5 278 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 CCDC127Q96BQ5 260 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 MYRFLQ96LU7 910 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 SYT15Q9BQS2 421 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 MKNK1Q9BUB5 465 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 TMLHEQ9NVH6 421 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 PCDHGA2Q9Y5H1 932 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 CACNA1HO95180 2353 aa20.22■□□□□ 0.83
TMEM53-201ENST00000372235 ARNTLO00327 626 aa20.21■□□□□ 0.83
TMEM53-201ENST00000372235 PDXKO00764 312 aa20.21■□□□□ 0.83
TMEM53-201ENST00000372235 KINO60870 393 aaKnown RBP20.21■□□□□ 0.83
TMEM53-201ENST00000372235 NOL4O94818 638 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms