RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PJA2O43164 708 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 MTRF1O75570 445 aaKnown RBP9.31□□□□□ -0.92
ATG4A-203ENST00000372232 FCER1AP12319 257 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 CCNE1P24864 410 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 MARK3P27448 753 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 EPHB2P29323 1055 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TKTP29401 623 aaKnown RBP9.31□□□□□ -0.92
ATG4A-203ENST00000372232 PPP1R2P41236 205 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 IFNAR2P48551 515 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 SHROOM1Q2M3G4 852 aaPredicted RBP9.31□□□□□ -0.92
ATG4A-203ENST00000372232 COBLL1Q53SF7 1204 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 IL23RQ5VWK5 629 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 ANKRD40Q6AI12 368 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TMEM214Q6NUQ4 689 aaKnown RBP9.31□□□□□ -0.92
ATG4A-203ENST00000372232 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 IFIH1Q9BYX4 1025 aaKnown RBP9.31□□□□□ -0.92
ATG4A-203ENST00000372232 NDEL1Q9GZM8 345 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 NPHS2Q9NP85 383 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 NYAP2Q9P242 653 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 SEL1LQ9UBV2 794 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 ADAMTSL1Q8N6G6 1762 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 POTEMA6NI47 508 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 MYMKA6NI61 221 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 CCDC169A6NNP5 214 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TNFRSF10AO00220 468 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 CAPN9O14815 690 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 ZBED4O75132 1171 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TBX10O75333 385 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 PTPN2P17706 415 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 SLC1A4P43007 532 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 RXRGP48443 463 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 VPS41P49754 854 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 RASSF2P50749 326 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 CCR3P51677 355 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 NEK3P51956 506 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TUBA4AP68366 448 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 LRP8Q14114 963 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 ARHGEF6Q15052 776 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 ARL13BQ3SXY8 428 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TNFAIP8L3Q5GJ75 292 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 SPDYAQ5MJ70 313 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 C6orf183Q5T699 404 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TATDN1Q6P1N9 297 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 CNNM4Q6P4Q7 775 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 ACAD11Q709F0 780 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 CROCCP2Q86T23 111 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 SATL1Q86VE3 508 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 SIAH1Q8IUQ4 282 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TMCO5AQ8N6Q1 288 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 USP38Q8NB14 1042 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 KIAA0895Q8NCT3 520 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 LARP4BQ92615 738 aaKnown RBP9.31□□□□□ -0.92
ATG4A-203ENST00000372232 HAS1Q92839 578 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 SKA1Q96BD8 255 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 NSMCE3Q96MG7 304 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 MYLK2Q9H1R3 596 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 FAM8A1Q9UBU6 413 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 PVALEFA0A1B0GWK0 134 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 RASA4BC9J798 803 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 RASA4O43374 803 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 PSMG1O95456 288 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 CTAG1AP78358 180 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SEPT7Q16181 437 aaKnown RBP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 QRICH1Q2TAL8 776 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 METTL21CQ5VZV1 264 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 CCDC81Q6ZN84 652 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 INTS8Q75QN2 995 aaKnown RBP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 PHLDB2Q86SQ0 1253 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 DCAF4Q8WV16 495 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SEC14L1Q92503 715 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 RAD54LQ92698 747 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 GRAMD1AQ96CP6 724 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 CDK5RAP3Q96JB5 506 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 TUBGCP2Q9BSJ2 902 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 FHDC1Q9C0D6 1143 aaPredicted RBP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 GLT8D2Q9H1C3 349 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 TRIM17Q9Y577 477 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 GREB1LQ9C091 1923 aaPredicted RBP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 A0A088AWK7 358 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SMIM23A6NLE4 172 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 TBKBP1A7MCY6 615 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 FAM47E-STBD1D6RA91 191 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 CES2O00748 559 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 ADCY3O60266 1144 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 RNASEH1O60930 286 aaKnown RBP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 KRT36O76013 467 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 OR6B1O95007 311 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 MSL3P1P0C860 447 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 CHRNA5P30532 468 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 MASP1P48740 699 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 ST13P50502 369 aaKnown RBP9.3□□□□□ -0.92
ATG4A-203ENST00000372232 DNM2P50570 870 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 TUBA1BP68363 451 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SQSTM1Q13501 440 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SLC15A2Q16348 729 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 ZNF423Q2M1K9 1284 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
ATG4A-203ENST00000372232 SLFN13Q68D06 897 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms