RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 COLGALT2Q8IYK4 626 aa19.58■□□□□ 0.73
VEGFA-206ENST00000372077 ATP8B1O43520 1251 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 CALCAP01258 141 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 MMEP08473 750 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 PAEPP09466 180 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 GNA15P30679 374 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 VAV2P52735 878 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 C10orf76Q5T2E6 689 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 TOP6BLQ8N6T0 577 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 MRPL45Q9BRJ2 306 aaKnown RBP19.58■□□□□ 0.72
VEGFA-206ENST00000372077 IL23AQ9NPF7 189 aa19.58■□□□□ 0.72
VEGFA-206ENST00000372077 B4GALT3O60512 393 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 ALKBH5Q6P6C2 394 aaKnown RBP19.57■□□□□ 0.72
VEGFA-206ENST00000372077 LEKR1Q6ZMV7 388 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 ABI1Q8IZP0 508 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 TWNKQ96RR1 684 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 PCDHB18PQ96TA0 734 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 ELOVL4Q9GZR5 314 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 HPCAL4Q9UM19 191 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 EFCAB14O75071 495 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 GATMP50440 423 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 ZNF394Q53GI3 561 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 DCLRE1AQ6PJP8 1040 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 SLC4A11Q8NBS3 891 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 NDST1P52848 882 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 PALB2Q86YC2 1186 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 CREG2Q8IUH2 290 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 KBTBD7Q8WVZ9 684 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 TMEM176AQ96HP8 235 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 RBM12Q9NTZ6 932 aaKnown RBP19.57■□□□□ 0.72
VEGFA-206ENST00000372077 HMGXB4Q9UGU5 601 aa19.57■□□□□ 0.72
VEGFA-206ENST00000372077 ATP8B3O60423 1300 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 CYB561D2O14569 222 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 PAPD7Q5XG87 772 aaKnown RBP19.56■□□□□ 0.72
VEGFA-206ENST00000372077 UNC93AQ86WB7 457 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 APPL2Q8NEU8 664 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 HNRNPLLQ8WVV9 542 aaKnown RBP19.56■□□□□ 0.72
VEGFA-206ENST00000372077 ZNF606Q8WXB4 792 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 SENP8Q96LD8 212 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 PRKAG2Q9UGJ0 569 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 NME7Q9Y5B8 376 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 HUS1O60921 280 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 SH2D3CQ8N5H7 860 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 TOP1MTQ969P6 601 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 OSBPL9Q96SU4 736 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 ZSWIM1Q9BR11 485 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 MYO1AQ9UBC5 1043 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 HYOU1Q9Y4L1 999 aa19.56■□□□□ 0.72
VEGFA-206ENST00000372077 TMEM189-UBE2V1I3L0A0 370 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 PJA2O43164 708 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 B3GAT3O94766 335 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 BAIAP3O94812 1187 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 GZMAP12544 262 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 WARSP23381 471 aaKnown RBP19.55■□□□□ 0.72
VEGFA-206ENST00000372077 NT5C1AQ9BXI3 368 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 MRPL9Q9BYD2 267 aaKnown RBP19.55■□□□□ 0.72
VEGFA-206ENST00000372077 NRDE2Q9H7Z3 1164 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 LUC7LQ9NQ29 371 aaKnown RBP19.55■□□□□ 0.72
VEGFA-206ENST00000372077 THAP12O43422 761 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 ACRP10323 421 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 ACTN2P35609 894 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 RNASELQ05823 741 aaKnown RBP19.55■□□□□ 0.72
VEGFA-206ENST00000372077 TIGD5Q53EQ6 642 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 C16orf59Q7L2K0 433 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 KLHL7Q8IXQ5 586 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 SPATA4Q8NEY3 305 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 TFAP2BQ92481 460 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 SNX12Q9UMY4 172 aa19.55■□□□□ 0.72
VEGFA-206ENST00000372077 FNDC1Q4ZHG4 1894 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-206ENST00000372077 TMCO5BA8MYB1 307 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 DGKIO75912 1065 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 ATP1A2P50993 1020 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 PPIGQ13427 754 aaKnown RBP eCLIP19.54■□□□□ 0.721e-7■■□□□ 12.5
VEGFA-206ENST00000372077 TSEN2Q8NCE0 465 aaKnown RBP19.54■□□□□ 0.72
VEGFA-206ENST00000372077 EXOC4Q96A65 974 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 FAM193BQ96PV7 902 aaPredicted RBP19.54■□□□□ 0.72
VEGFA-206ENST00000372077 ISCUQ9H1K1 167 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 CENPHQ9H3R5 247 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 SEPT11Q9NVA2 429 aaKnown RBP19.54■□□□□ 0.72
VEGFA-206ENST00000372077 KIAA1257Q9ULG3 409 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 PALMO75781 387 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 AMHP03971 560 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 WDR5P61964 334 aaKnown RBP19.54■□□□□ 0.72
VEGFA-206ENST00000372077 SF3A3Q12874 501 aaKnown RBP eCLIP19.54■□□□□ 0.729e-12■■■■■ 32
VEGFA-206ENST00000372077 C7orf61Q8IZ16 206 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 ADGRF2Q8IZF7 708 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 BADQ92934 168 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 TAS2R14Q9NYV8 317 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 PCDH10Q9P2E7 1040 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 DNAJB4Q9UDY4 337 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 INTUQ9ULD6 942 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 PCDHGC3Q9UN70 934 aa19.54■□□□□ 0.72
VEGFA-206ENST00000372077 TBKBP1A7MCY6 615 aa19.53■□□□□ 0.72
VEGFA-206ENST00000372077 GABRDO14764 452 aa19.53■□□□□ 0.72
VEGFA-206ENST00000372077 CYP1A1P04798 512 aaPredicted RBP19.53■□□□□ 0.72
VEGFA-206ENST00000372077 VDRP11473 427 aa19.53■□□□□ 0.72
VEGFA-206ENST00000372077 DSTYKQ6XUX3 929 aa19.53■□□□□ 0.72
VEGFA-206ENST00000372077 CCNI2Q6ZMN8 369 aaPredicted RBP19.53■□□□□ 0.72
VEGFA-206ENST00000372077 TRIM72Q6ZMU5 477 aa19.53■□□□□ 0.72
VEGFA-206ENST00000372077 OR6B3Q8NGW1 331 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms