RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 TCEAL8Q8IYN2 117 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 TTC39CQ8N584 583 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 C2orf15Q8WU43 125 aaKnown RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 VPS16Q9H269 839 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 FAM124BQ9H5Z6 455 aaPredicted RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 CYP4F11Q9HBI6 524 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 THEGQ9P2T0 379 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 CD207Q9UJ71 328 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 NME7Q9Y5B8 376 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 MTCL1Q9Y4B5 1905 aaKnown RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 ZMYND10O75800 440 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 SEC24AO95486 1093 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 VNN2O95498 520 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 C8AP07357 584 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 CD58P19256 250 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 NDST1P52848 882 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 COPB1P53618 953 aaKnown RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 MAPRE1Q15691 268 aaKnown RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 CLUL1Q15846 466 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 FAM171BQ6P995 826 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 UNC93AQ86WB7 457 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 C12orf76Q8N812 135 aaPredicted RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 CMASQ8NFW8 434 aaPredicted RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 SLC7A14Q8TBB6 771 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 PKMYT1Q99640 499 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 ZDHHC7Q9NXF8 308 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 GTF3C4Q9UKN8 822 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 MYBPHLA2RUH7 354 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 LRRC10BA6NIK2 292 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 ATP2C2O75185 946 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 RFPL2O75678 378 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 HNRNPA1P09651 372 aaKnown RBP eCLIP16.98■□□□□ 0.31
PFDN4-201ENST00000371419 ATP1A3P13637 1013 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 PTPN1P18031 435 aaKnown RBP16.98■□□□□ 0.31
PFDN4-201ENST00000371419 HOXA9P31269 272 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 YWHAEP62258 255 aaKnown RBP16.98■□□□□ 0.31
PFDN4-201ENST00000371419 DUSP4Q13115 394 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 LEXMQ3ZCV2 418 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 PPM1LQ5SGD2 360 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 RARS2Q5T160 578 aaKnown RBP16.98■□□□□ 0.31
PFDN4-201ENST00000371419 TRIM65Q6PJ69 517 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 PPM1KQ8N3J5 372 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 ATAD1Q8NBU5 361 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 SMRP1Q8NCR6 262 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 MYCBPAPQ8TBZ2 947 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 SPPL2BQ8TCT7 592 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 TNIP3Q96KP6 325 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 ARID3AQ99856 593 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 DNAI2Q9GZS0 605 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 S1PR5Q9H228 398 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 DPEP3Q9H4B8 488 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 CRTAC1Q9NQ79 661 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 CISHQ9NSE2 258 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 TMLHEQ9NVH6 421 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 HSFX1Q9UBD0 423 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 PCDHB5Q9Y5E4 795 aa16.98■□□□□ 0.31
PFDN4-201ENST00000371419 CCDC195A0A1B0GUA6 201 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 CBFA2T2O43439 604 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 ZNF500O60304 480 aaPredicted RBP16.97■□□□□ 0.31
PFDN4-201ENST00000371419 CILPO75339 1184 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 TRIM21P19474 475 aaKnown RBP16.97■□□□□ 0.31
PFDN4-201ENST00000371419 SLC9A1P19634 815 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 PON1P27169 355 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 GCNT1Q02742 428 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 TFF2Q03403 129 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 ITIH3Q06033 890 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 AAK1Q2M2I8 961 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 FKBP15Q5T1M5 1219 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 CES5AQ6NT32 575 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 TMC5Q6UXY8 1006 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 C4orf50Q6ZRC1 276 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 B3GALNT2Q8NCR0 500 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 APOL5Q9BWW9 433 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 NT5C1AQ9BXI3 368 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 ADAM7Q9H2U9 754 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 ABI2Q9NYB9 513 aaPredicted RBP16.97■□□□□ 0.31
PFDN4-201ENST00000371419 HMGXB4Q9UGU5 601 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 INSL5Q9Y5Q6 135 aa16.97■□□□□ 0.31
PFDN4-201ENST00000371419 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.97■□□□□ 0.31
PFDN4-201ENST00000371419 PAPLNO95428 1278 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 TUFMP49411 452 aaKnown RBP16.96■□□□□ 0.31
PFDN4-201ENST00000371419 CDR1P51861 262 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 SMAD4Q13485 552 aaKnown RBP16.96■□□□□ 0.31
PFDN4-201ENST00000371419 CCDC142Q17RM4 750 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 MDH1BQ5I0G3 518 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 PHLDB3Q6NSJ2 640 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 CYP26C1Q6V0L0 522 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 RRAGAQ7L523 313 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 APTXQ7Z2E3 356 aaKnown RBP16.96■□□□□ 0.31
PFDN4-201ENST00000371419 ACOT1Q86TX2 421 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 SPATA2LQ8IUW3 424 aaPredicted RBP16.96■□□□□ 0.31
PFDN4-201ENST00000371419 ARHGEF19Q8IW93 802 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 CRYBG2Q8N1P7 616 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
PFDN4-201ENST00000371419 FUBP3Q96I24 572 aaKnown RBP eCLIP16.96■□□□□ 0.31
PFDN4-201ENST00000371419 FAM81BQ96LP2 452 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 PRKD2Q9BZL6 878 aa16.96■□□□□ 0.31
PFDN4-201ENST00000371419 CRISPLD1Q9H336 500 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms