RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 ZBTB33Q86T24 672 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 SEPT12Q8IYM1 358 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 ANKLE1Q8NAG6 615 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 TUBB6Q9BUF5 446 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 UNC45AQ9H3U1 944 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 OCEL1Q9H607 264 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 EHMT1Q9H9B1 1298 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 SMYD2Q9NRG4 433 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 CASZ1Q86V15 1759 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 LIN7AO14910 233 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 ADRB2P07550 413 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 APRTP07741 180 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 SKIV2L2P42285 1042 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 PPP4CP60510 307 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 AP3B2Q13367 1082 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 CNGA3Q16281 694 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 C16orf46Q6P387 395 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 C1orf186Q6ZWK4 172 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 PTF1AQ7RTS3 328 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 NDUFAF2Q8N183 169 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 TMEM109Q9BVC6 243 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 FBXO28Q9NVF7 368 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 PRR5-ARHGAP8B1AHC4 643 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 SMAPO00193 183 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 OAS1P00973 400 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 PROCP04070 461 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 GALK1P51570 392 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 ARHGAP8P85298 464 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 GRAPQ13588 217 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 CCNG2Q16589 344 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 CEP55Q53EZ4 464 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 EMC1Q8N766 993 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 ACTL9Q8TC94 416 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 MORC4Q8TE76 937 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 E2F7Q96AV8 911 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 SLC9A2Q9UBY0 812 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 PPM1HQ9ULR3 514 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 EXOC7Q9UPT5 735 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 APOBEC2Q9Y235 224 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 LZTS1Q9Y250 596 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 INPP5FQ9Y2H2 1132 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 NUP98P52948 1817 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 C2CD2LO14523 706 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 GRAP2O75791 330 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 STAM2O75886 525 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 SEC24DO94855 1032 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 CFHP08603 1231 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 C6orf222P0C671 652 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 GZMAP12544 262 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 ECE1P42892 770 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 KBTBD12Q3ZCT8 623 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 MCOLN2Q8IZK6 566 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 CLMNQ96JQ2 1002 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 LRGUKQ96M69 825 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 P2RX7Q99572 595 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 OLFML3Q9NRN5 406 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 RAB6BQ9NRW1 208 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
PRPF38B-201ENST00000370021 A0A1B0GUL6 1792 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 CCDC78A2IDD5 438 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 ELK3P41970 407 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 PRAMEP78395 509 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 CDK16Q00536 496 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 OTUD4Q01804 1114 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 C11orf91Q3C1V1 193 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 SH2D4BQ5SQS7 431 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 ACBD5Q5T8D3 534 aaPredicted RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 LGSNQ5TDP6 509 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 IL31Q6EBC2 164 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 PPP4R1Q8TF05 950 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 GDPD5Q8WTR4 605 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 PPWD1Q96BP3 646 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 MMP19Q99542 508 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 PRPF18Q99633 342 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 ECSITQ9BQ95 431 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 E7ENQ6 273 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 DNALI1O14645 258 aaPredicted RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 SETSIPP0DME0 302 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 NCOA4Q13772 614 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 LBRQ14739 615 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 LIN52Q52LA3 116 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 ANKRD22Q5VYY1 191 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 CLEC4GQ6UXB4 293 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 OTOP1Q7RTM1 612 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 WDR75Q8IWA0 830 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 KBTBD2Q8IY47 623 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 ARHGEF1Q92888 912 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 GPR88Q9GZN0 384 aa10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 TDRD3Q9H7E2 651 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 TDRKHQ9Y2W6 561 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-201ENST00000370021 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.67
PRPF38B-201ENST00000370021 GOLGA8QA0A0J9YX86 632 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 GOLGA8OA6NCC3 632 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 GOLGA8NF8WBI6 632 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 RHBDL3P58872 404 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 AP1B1Q10567 949 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 TRPC3Q13507 836 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 KLHL38Q2WGJ6 581 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms