RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RSRC1Q96IZ7 334 aaKnown RBP11.28□□□□□ -0.6
TPM3-212ENST00000368533 ZFP42Q96MM3 310 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 NOD2Q9HC29 1040 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 RRN3P2A6NIE6 340 aa11.27□□□□□ -0.6
TPM3-212ENST00000368533 HOXD8P13378 290 aaPredicted RBP11.27□□□□□ -0.6
TPM3-212ENST00000368533 MDH1P40925 334 aaKnown RBP11.27□□□□□ -0.6
TPM3-212ENST00000368533 MARCKSL1P49006 195 aa11.27□□□□□ -0.6
TPM3-212ENST00000368533 ANKRD20A8PQ5CZ79 823 aa11.27□□□□□ -0.6
TPM3-212ENST00000368533 BZW1Q7L1Q6 419 aaKnown RBP11.27□□□□□ -0.6
TPM3-212ENST00000368533 UHMK1Q8TAS1 419 aaKnown RBP11.27□□□□□ -0.6
TPM3-212ENST00000368533 RECQL4O94761 1208 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 TMEM253P0C7T8 217 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
TPM3-212ENST00000368533 HSPA9P38646 679 aaKnown RBP11.27□□□□□ -0.61
TPM3-212ENST00000368533 THPOP40225 353 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 TMEM132DQ14C87 1099 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 TWNKQ96RR1 684 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 SDCBP2Q9H190 292 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 SPC25Q9HBM1 224 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 TMEM59LQ9UK28 342 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 NOVA2Q9UNW9 492 aaKnown RBP11.27□□□□□ -0.61
TPM3-212ENST00000368533 NOD1Q9Y239 953 aa11.27□□□□□ -0.61
TPM3-212ENST00000368533 HMGB1P1B2RPK0 211 aaPredicted RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 FAM107AO95990 144 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 ASS1P00966 412 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 ACO1P21399 889 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 ANXA13P27216 316 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 PLTPP55058 493 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CLDN10P78369 228 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CDR2Q01850 454 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CAPRIN2Q6IMN6 1127 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 TMEM174Q8WUU8 243 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 DDX1Q92499 740 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 ZSWIM1Q9BR11 485 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 INTUQ9ULD6 942 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 SNX24Q9Y343 169 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CDY2AQ9Y6F7 541 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 COL1A2P08123 1366 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 A0A0A6YYK5 440 aaPredicted RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 SEPT4O43236 478 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 ANP32DO95626 131 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 GHRP10912 638 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 ABCD1P33897 745 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 SSR1P43307 286 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 DR1Q01658 176 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 GCNT1Q02742 428 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 YTHDF3Q7Z739 585 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 TFAP2BQ92481 460 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 NUP85Q9BW27 656 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 XYLT2Q9H1B5 865 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 PPME1Q9Y570 386 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 SCN1AP35498 2009 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CES2O00748 559 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 ATP6V1G2O95670 118 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 RRM1P23921 792 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CCDC142Q17RM4 750 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 PAN2Q504Q3 1202 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 MREGQ8N565 214 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 ARRDC4Q8NCT1 418 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 C3orf20Q8ND61 904 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 C1orf131Q8NDD1 294 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 HES6Q96HZ4 224 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 SLITRK6Q9H5Y7 841 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CNOT8Q9UFF9 292 aaKnown RBP11.26□□□□□ -0.61
TPM3-212ENST00000368533 GGT7Q9UJ14 662 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 USTQ9Y2C2 406 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 SIP14410 1827 aa11.26□□□□□ -0.61
TPM3-212ENST00000368533 CITO14578 2027 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 MBLAC1A4D2B0 266 aaPredicted RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 ANKRD62A6NC57 917 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 A6NNZ2 444 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 HAS3O00219 553 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 KIAA0391O15091 583 aaKnown RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 SPOPO43791 374 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 PYGLP06737 847 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 MCF2P10911 925 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 APLP1P51693 650 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 ZNF667Q5HYK9 610 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 TBC1D1Q86TI0 1168 aaPredicted RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 ARFGAP2Q8N6H7 521 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 C12orf29Q8N999 325 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 ZNF296Q8WUU4 475 aaPredicted RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 KRT35Q92764 455 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 HPDLQ96IR7 371 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 NAP1L3Q99457 506 aaPredicted RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 FMO2Q99518 471 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 NIF3L1Q9GZT8 377 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 SNX9Q9Y5X1 595 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms